Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0939 ATGGTTTACAGCAGTTGTCTAAGGTCTTTGGTTGTTCAACTTGGATCCTTCACCAATAAAGTGCCATTCTACAACATTGTGAGAAGTTTGCATAAAGTTCCCTCCATTACTTATTCGTGGAATCGTGGATTTAAGACAAGCATAGGGATGATGGTTAATACAGGTGATATGTCAAACGCGGGACCCATTGTTGATATGTTGCCAGAGAAAGATGATGACGGTGGGTTTGCCAGTGGAGGGTGGAAAAGTGAAGATGGAAGACTTCGCTGTGGGTATTCAAGTTTTAGAGGAAAAAGGGTTACCATGGAGGATTTTTATGATATTAAGATATCAAATATTGATGGTCGATCGGTTTGCTTGTTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAACCTCATGAAGCATCCAAAATTTTTGACTGATACCAAATTGGCTATAAGTGAAACTTATCAACAGACGGATGCTGATTTTCTGGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACCGCAGTTTTGGTTGATAACCATCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTATGTTGTGGCAGAACCTGAGATCCAGGAACAGGTAATAGATGAAGAGCTGGAGTTGCTGGTACTTGCAAGTGATGGACTATGGGATGTAGTATCAAATGATGACGCTGCTTCTCTTGCCCGTGCTGCAGATGAACCCGAAGCAGCCGCTCGTAGGCTAACTGAAGCCGCATTTAGTCGGGGTAGTGCAGATAACATTACATGCATTGTGGTGCGGTTCCATCATGATAAAGCAAACCCAGCTAATTTTGAGGAAGCAGGTCCAGGATCCAGCTAG 1062 0.435 MVYSSCLRSLVVQLGSFTNKVPFYNIVRSLHKVPSITYSWNRGFKTSIGMMVNTGDMSNAGPIVDMLPEKDDDGGFASGGWKSEDGRLRCGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQYVVAEPEIQEQVIDEELELLVLASDGLWDVVSNDDAASLARAADEPEAAARRLTEAAFSRGSADNITCIVVRFHHDKANPANFEEAGPGSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0939 353 SMART PP2C_4 79 333 IPR001932 -
Lele26g0939 353 CDD PP2Cc 89 335 IPR001932 -
Lele26g0939 353 FunFam Probable protein phosphatase 2C 76 81 341 - -
Lele26g0939 353 Pfam Protein phosphatase 2C 90 328 IPR001932 -
Lele26g0939 353 PANTHER PROTEIN PHOSPHATASE 77 335 - -
Lele26g0939 353 SUPERFAMILY PP2C-like 85 336 IPR036457 -
Lele26g0939 353 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Lele26g0939 353 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Lele26g0939 353 SMART PP2C_SIG_2 71 335 IPR001932 -
Lele26g0939 353 Gene3D - 80 349 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0939 Lele-ChrLele26 6043610 6047578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0939 1 346 PP2C-type Phosphatase Gene Family AT5G53140 68.715 1.23e-178 500