Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0938 ATGATGGATTGCAACAAAGATGAGGCTTTTAGGGCCAAGGAAATAGCTGAGAAGAAATTTTCAGACAGGGAATATGCTGGTGCTAAGAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCTCTGGATGGTCTTTCACAGTTTTTGATCAACCTTGATGTTTACATCTCTGCTGAGAATAAAGTTAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAAACCCTTTGATGATGAAGAGACAGTTAGAAAACAGTACAGGAAGCTGGCTCTCACTCTTCACCCAGATAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTGTCAGATAAAACCAAGAGACTAGAATATAACCTGAAGAGGAGTTTGAAAGGTTTTCAACATAAAACTCCCAACCATGCTGGATCTCAATCAGAAGTACCTGGTTCAAATGGTTTTTATAATTTCAACAAGAATGTAACTTCAAATGTGAGGGCTGGAAATAGTAATGCCCAGGCACGCCATGCCTCAGCTCCTCGTCCACAGAAGAAGGCTGACACCTTTTGGACTGTTTGTAATCGATGCAGGACTCATTATGAATACCTTAGGGTTTATTTGAATCATAGACTCCTATGTCCCAATTGTAACGAAGCTTTCTTGGCTATAGAGAAGGAGCCACCTCCCAACTATTTCAAGTCAACAAATTGGTCTTCCCGCCAGCAGAATCAGAGTTCTCGACGTCATGCTTCAAGTAATAATCAATCTATTGATGGAAAATTTTTTACAGTTTCTCAAAATTCAGATGCCAGTGGTACTTCAGGCATGCCATCATTTAGTAAAACAAGTTTTCAGTGGGGTCCTCACTCTAGCAAGGCTGGTTTTGGTGGTATGGATGGGTCATCTGTTGCTGCTCAAGCTGCAAGTGTTGTGCAGCAGGCTAGTGAGAAAGTCAGAAGGGAACATGAGGGAGCACCGTCAATTGCTGAATGGGAGAGGAGTCAAATGTCTAAGAGGACTGATGGTTCCTTTCATAAAGTAGAGAAATGGAAGAAGAGGAGGACGGATGATACTGGTACAAATGGTATTAAAGGATACATGGGAAACCATATGACCGTGGGACAAGGAGCAGCTGGTATGGGATATGCTTCTGATTCAAGAAAAGGTAACTGGGAAACTGAAAGAAGCTATGGTTTTTCAGGCATGAAGCCCAGCAGTACGAGAGAGTTATCATTGTTTGAAATCCGAAATATGTTAGTGGATAAGGCACAAAGTGAAATTCGCAAGAAACTTGAAGAATGGAAATGGGTAGCTCAATCTAAGATCACAAGCAAGTCCAAAGAGAATAAGAGACAAAAAAGCGCATTGACCAGTAAAACATCTGATCCGAAGAAGCATAAAGAGTCCATTCCTGATAATAGCTGTCAAGTAGAAGGTGATTCTTTCCTTGTCACTTCTGATAATACGGTTAAGGAGGATCAATCCTACATCATAATGAATGTTCCAGACCCTGATTTCCACAATTTTGACTTGGACAGAACTGAAAATGCCTTTGGTGAGGACCAGGTCTGGGCTGCTTATGATGACGACGATGGAATGCCTCGTTATTATGCTCGAATTCACAAGGTGATATCCATGGAGCCATTTAGAATGCGAATCAGCTGGCTTAACTCTAGAAGCAACAGTGAATTGGGTCCCATAGATTGGATAGGTGCTGGTTTTACTAAAACTTGTGGGGACTTTAGGACTGGCAAGCATGAAATAACTGAGTCATTGAATTCATTCTCACACAAAGTTAGGTGGACAAAAGGCACCAGAGGAGTCATTCGCATCTTTCCCCAGAAAGGGGAAGTCTGGGCTCTATATAAGGACTGGTCTCCCGATTGGAACGAACAGACTCCAGATGAAGTGATACACAAATATGATATGGCTGAGGTGCTTGAAGATTTTGACGAGGAGCTCGGGGTATTAATTGCCCCATTGATTAAGCTTCCAGATTTCAGGACTGTGTTTAGAAGGCATGCTGATCCTGATCGGGTGATGAGGATTCCTAAAGAGGAGATGTTTCGTTTTTCTCACCAGGTTCCTAATTACATCCTTACAGGGGAAGAAGCCGATAATGCTCCTGAGGGTTGTCGAGAGTTGGATCCAGCAGCTACACCTTTAGACCTTCTTCGAGCCACTGCGGAATCTAATGAGGGATCGGGTGCTGAAAGGCCTGACGAAGACGCTTTGCCCAATTCAATTGAAATGGAGAAAGCTTCAGAAACAAGAGGAGGGGAACAATTGAAGGAGATTTTTACATAG 2313 0.4254 MMDCNKDEAFRAKEIAEKKFSDREYAGAKKFALKALNLYPALDGLSQFLINLDVYISAENKVSGEMDWYGILGVKPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNLKRSLKGFQHKTPNHAGSQSEVPGSNGFYNFNKNVTSNVRAGNSNAQARHASAPRPQKKADTFWTVCNRCRTHYEYLRVYLNHRLLCPNCNEAFLAIEKEPPPNYFKSTNWSSRQQNQSSRRHASSNNQSIDGKFFTVSQNSDASGTSGMPSFSKTSFQWGPHSSKAGFGGMDGSSVAAQAASVVQQASEKVRREHEGAPSIAEWERSQMSKRTDGSFHKVEKWKKRRTDDTGTNGIKGYMGNHMTVGQGAAGMGYASDSRKGNWETERSYGFSGMKPSSTRELSLFEIRNMLVDKAQSEIRKKLEEWKWVAQSKITSKSKENKRQKSALTSKTSDPKKHKESIPDNSCQVEGDSFLVTSDNTVKEDQSYIIMNVPDPDFHNFDLDRTENAFGEDQVWAAYDDDDGMPRYYARIHKVISMEPFRMRISWLNSRSNSELGPIDWIGAGFTKTCGDFRTGKHEITESLNSFSHKVRWTKGTRGVIRIFPQKGEVWALYKDWSPDWNEQTPDEVIHKYDMAEVLEDFDEELGVLIAPLIKLPDFRTVFRRHADPDRVMRIPKEEMFRFSHQVPNYILTGEEADNAPEGCRELDPAATPLDLLRATAESNEGSGAERPDEDALPNSIEMEKASETRGGEQLKEIFT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0938 770 MobiDBLite consensus disorder prediction 233 259 - -
Lele26g0938 770 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Lele26g0938 770 Pfam DnaJ domain 67 128 IPR001623 -
Lele26g0938 770 MobiDBLite consensus disorder prediction 336 358 - -
Lele26g0938 770 MobiDBLite consensus disorder prediction 729 770 - -
Lele26g0938 770 CDD DnaJ 67 120 IPR001623 -
Lele26g0938 770 PANTHER BNAC03G44070D PROTEIN 2 723 - -
Lele26g0938 770 Gene3D DnaJ domain 64 177 IPR036869 -
Lele26g0938 770 SUPERFAMILY Chaperone J-domain 59 127 IPR036869 -
Lele26g0938 770 MobiDBLite consensus disorder prediction 444 480 - -
Lele26g0938 770 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele26g0938 770 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele26g0938 770 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele26g0938 770 SMART dnaj_3 66 123 IPR001623 -
Lele26g0938 770 MobiDBLite consensus disorder prediction 446 475 - -
Lele26g0938 770 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele26g0938 770 Pfam Domain of unknown function (DUF3444) 500 706 IPR024593 -
Lele26g0938 770 MobiDBLite consensus disorder prediction 737 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0938 Lele-ChrLele26 6036811 6039123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0938 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 1.82e-29 119