Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0930 ATGACGACGACAGCAGACGTGGGAGGGAAACGTCACAGTCTGACGACTTTCAAATCGTTCCACCCAACCTTCATGGAGAAGGTCAACATGGCAGAGTGGGAGAGTAGGCTTATCAATGAGCTAGTACAAGGTAGGGAGCTGGCGATGCGGCTCCAGATGTGCCTCCACGCGCCCTCTTCCTCCCAAGAAACCCGCGAGTTCTTGATCCAGAGAATCATAACCGCATTCGAAAAGGCACTTGCAACGGTCAACTGGAACGGGGGCTCGTCGGTCGGAATCCCGACTTCGGAGTCACCACCTTTTAGTGGTAGTCCTCGCAGCGAAGACTCTGACAGGGATTTCCAAGACCAAAACGCCTCCAAAAAGAGAAGCATGCCGAGGTGGACTAAACAGATTAGAGTTAGCCCAGGGATGGGAGTGGAAGGGACTCTTGACGATGGATATAGCTGGAGAAAATATGGCCAGAAAGAGATTCTGGGAGCCCAGTTTCCCAGAGGGTATTACAGATGCACCCACAGAAATGATCAAGGATGCTTGGCCACGAAGCAAGTGCAAAGATCTGATGAAGACCCCAATGTATTTGAAATCACCTACAGAGGAAAGCACACCTGTGCACAGTCATCATCCAATGCGGTTCCTCCATCTGGCACTCAAGAACGCCATGGACTGAGTCCAAATGCTGCAGATCCTCAGCAACTATCACAAGAACAACAACTACTTTTGAAACTTCGAGCTGGGCTCAGAGTTCAAACCGACAACCTAGATGTCCCCGATCCGGAACCATCATCATTTACCTCACTTATTTTTGCTTCAACCAGCTCCTCCATTATGAATCATGGAAACCAGATGTTTACAAGCTCCATGCTGGAAAACAATCTTGCCGACAACCTTAATACTTCTGATCCTTCCTATATGTCCCCAGCCACATCAGCAATACCCTACTTTTCGGTGTCTCCAAGTGGAGTCAGCAACATGTTGGGTGAGATGCCAAGCATGGCAACTTCTGGGTCTGAGATCAACGACATGGTCTCAGCCGTTACCTCAGCCGCTAACTCCCCAACCGTTGGTTTAGACCTTCCATTTGATCATCAGTTCCGATATGACGGACACAACTTCACCTTTGATAACCAGCGGTTCTTCTAA 1143 0.4926 MTTTADVGGKRHSLTTFKSFHPTFMEKVNMAEWESRLINELVQGRELAMRLQMCLHAPSSSQETREFLIQRIITAFEKALATVNWNGGSSVGIPTSESPPFSGSPRSEDSDRDFQDQNASKKRSMPRWTKQIRVSPGMGVEGTLDDGYSWRKYGQKEILGAQFPRGYYRCTHRNDQGCLATKQVQRSDEDPNVFEITYRGKHTCAQSSSNAVPPSGTQERHGLSPNAADPQQLSQEQQLLLKLRAGLRVQTDNLDVPDPEPSSFTSLIFASTSSSIMNHGNQMFTSSMLENNLADNLNTSDPSYMSPATSAIPYFSVSPSGVSNMLGEMPSMATSGSEINDMVSAVTSAANSPTVGLDLPFDHQFRYDGHNFTFDNQRFF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0930 380 FunFam WRKY transcription factor 53 130 207 - -
Lele26g0930 380 SMART WRKY_cls 144 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g0930 380 MobiDBLite consensus disorder prediction 204 232 - -
Lele26g0930 380 MobiDBLite consensus disorder prediction 91 105 - -
Lele26g0930 380 Pfam WRKY DNA -binding domain 145 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g0930 380 MobiDBLite consensus disorder prediction 91 132 - -
Lele26g0930 380 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 35 313 IPR044810 GO:0003700
Lele26g0930 380 ProSiteProfiles WRKY domain profile. 139 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g0930 380 MobiDBLite consensus disorder prediction 106 120 - -
Lele26g0930 380 SUPERFAMILY WRKY DNA-binding domain 143 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g0930 380 Gene3D WRKY domain 138 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0930 Lele-ChrLele26 5972715 5974671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0930 31 222 WRKY Transcription Factor Family AT5G24110 48.020 1.18e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele26g0930 WRKY 1.6e-27 CL0274