Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0923 ATGGAACAGAGTATCCTATGCAAATACACTGTTCACGACAGTGTTACCAAGAAGTACCCTAAACCGGTGGCGTCCAATAGGTCTTCCGATGTTCACAGCCCCATAGAGCCCAGGGTGGTTCGGATATCCGTCACCGATCCAGACGCCACTGACTCCTCCAGCGATGAGGAAGGAGAGTTCCTCTTTGGTCGCCAGAGAGTGAAGCGTTATGTGAACCAGGTTAATATCGAGCCAAGCTGCAAGAGCGCGGTGTCTTCCAATCCGCGAAAGAGGCCCGCAGGAGAAACTCAAGCCTGCCGGCGGCCGGTGAAGGTTTCCTCTACAAATAACGGAAGGAAGTTCCGAGGCGTACGACAGAGACCTTGGGGGAAGTGGGCGGCGGAGATTAGAGATCCCGCTCGCCGCGTACGCGTGTGGTTAGGCACCTTCGACACTGCAGAGGAAGCTGCGATGGTTTATGATAATGCAGCGATTAAGATACGGGGACCAGACGCGTTGACAAACTTCGTGACCCCACCGCCGAGGGAAAAGCCGGAAGAAGCAGAAGTGGCGGTGAAGCCAGAAATCAATGTGGTGGTGAAGTCGGAAGCGTCGGGCTCCGGCTACGATTCCGGCGACGAGTCACATCGCCTTCCATCTCCCACTTCAGTGCTGCAATTCAGAGGCAGTTGCAGCGAAGAGACCGAACCGCAGAAGGCAAGCGAACCGGAGAAAGAGAGCGAGGCGGAGACGGCGGCAGCCGAAGTGGAAGATGTGTTCCGGGAGAGTGAAGACGAAACGAGTCTGTCAGATGAGAAGGTGGACTATTTCGGGTTCGACATGGCAAAGGAGGAGGATTACTTCGGGTTCGAAATGCCAAATTGGGAGCAAGTGTTCGATTTCTCGACGCCGGAACCGGAGTACTCATTACTGTTCGAGGAACCTCCTCCGTTTCTGGGGGAGACGACGGCGATGTTAGCAGAGGAAGATGTCAGAGTGGGCGATAACACCGTTGGGGGGTCAGAGTTAGAGTTGGAGTTGGAGAAATCGTTCTCGCCATCGACGTCGTGCCAAATGGACGATTACTTTCAAGACATATTGTCGGGTTCGGACCCTCTGGTGATGCTGTGA 1110 0.5477 MEQSILCKYTVHDSVTKKYPKPVASNRSSDVHSPIEPRVVRISVTDPDATDSSSDEEGEFLFGRQRVKRYVNQVNIEPSCKSAVSSNPRKRPAGETQACRRPVKVSSTNNGRKFRGVRQRPWGKWAAEIRDPARRVRVWLGTFDTAEEAAMVYDNAAIKIRGPDALTNFVTPPPREKPEEAEVAVKPEINVVVKSEASGSGYDSGDESHRLPSPTSVLQFRGSCSEETEPQKASEPEKESEAETAAAEVEDVFRESEDETSLSDEKVDYFGFDMAKEEDYFGFEMPNWEQVFDFSTPEPEYSLLFEEPPPFLGETTAMLAEEDVRVGDNTVGGSELELELEKSFSPSTSCQMDDYFQDILSGSDPLVML 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0923 369 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Lele26g0923 369 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Lele26g0923 369 MobiDBLite consensus disorder prediction 197 248 - -
Lele26g0923 369 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
Lele26g0923 369 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Lele26g0923 369 CDD AP2 113 169 IPR001471 GO:0003700|GO:0006355
Lele26g0923 369 Gene3D AP2/ERF domain 112 171 IPR036955 GO:0003700|GO:0006355
Lele26g0923 369 SMART rav1_2 113 176 IPR001471 GO:0003700|GO:0006355
Lele26g0923 369 PIRSF PTI6 4 226 IPR017392 GO:0003700
Lele26g0923 369 PIRSF PTI6 221 309 IPR017392 GO:0003700
Lele26g0923 369 MobiDBLite consensus disorder prediction 228 248 - -
Lele26g0923 369 MobiDBLite consensus disorder prediction 209 227 - -
Lele26g0923 369 SUPERFAMILY DNA-binding domain 113 170 IPR016177 GO:0003677
Lele26g0923 369 MobiDBLite consensus disorder prediction 17 57 - -
Lele26g0923 369 FunFam Ethylene-responsive transcription factor 2 112 171 - -
Lele26g0923 369 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 37 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0923 Lele-ChrLele26 5943306 5944415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0923 7 293 AP2-EREBP Transcription Factor Family AT4G27950 45.819 7.11e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g0923 AP2 4.4e-14 CL0081