Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0920 ATGAACCTCTTGATAACTTTGTCAGCAGCCTTCGTCATTGGGGTGATTTTCGTGAGTGTTGATGCTGAACCAGTGGTAGACAAAAAAGCGTTGCTTGATTTCTATCGCACTATCGGTCAGTCTCATCCTCTCAACTGGGATGAGAATTCTTCTGCATGCAACAACTGGAGAGGAGTTTTCTGCAACAGCGAACAATCCAGAGTCATAGCCCTCCATTTACCTGGAGCTGGGTTGAGCGGTCCAATCCCATCGAACACTCTGAGTCGTCTCTCAGAACTTCAAACTTTGAGTCTTAGATTCAATAGAATAACTGGTCCTTTTCCTTCTGATTTCTCTGAGCTTAAGAACTTGAGTTATGTTTATCTCCAATTCAACAAGTTTTCCGGCCCATTACCATCGGATTTTTCTGTTTGGAATAATCTTAACGTCATCGATTTATCCAATAATTCTTTTAACGGAAGCATCCCTTCTTCCATTACAAATTTGACTCATCTCACATCTTTAGTCTTAGCCAACAACTCGCTTTCCGGGGAAATTCCTGACCTCGATATTCCCAGACTAAAAGTGCTCAATTTAGCCAACAACCACCTTAGTGGGGTTGTGCCTAAATCCCTTGAGAGATTTCCAGGTTCAGCTTTTTCTGGTAACAACAATCTTACAACAGAAAATACACTTCCCCCAGCTATTCCACTTCAACCACCAAATGCTCATCCGAGAAAGAAAACCACTCTAAGCGAGCCTGTATTGTTGGCTATTATCATTGGTGGCTGTGTGCTATTATTTCTGGTGATTGCAACTTTCATGCTTATCCGAAGCTATCAGAAAGCAGATGACGAAGTGCCAGCAGTGAAGTCAAAGAAAAAGGAAGACTCTCTGAAGAAAGAAGTATCTGAAACCGAAAGTCAAGACAAGAACAAGATTGTGTTCTTTGAGGGTCGCCATATTGCCTTTGACCTGGAAGACCTGTTGAGATCATCTGCTGAGGGTAGCGTTTCTGCATTGTTGCATGGTAGAAAAGGGGAAGGCAGGGCTTCTTTAGACTGGGATAGTCGGCTGAGAATTGCAATAGGTGCGGCAAGAGGGATGGCTCACATCCACACGCAACATGGAGGGAAACTAGTACATGGCAACCTAAAAGCCTCAAACGTCTTCTTAAACTCTCAAGGGTATGGTTGTGTATCTGATGCAGGTTTGGCCACATTAACAAGTTCAATACCCTTACTGCCGCAGAGAAATGGAGGGTACCGGGCACCGGAAGTAACGGACATCAGAAAAGCCAGCCATGCAGCTGACGTATACAGTTTTGGGGTGCTGGTGCTTGAGCTTCTGACAGGGAAATCACCCATACATGCCATGGGGAGTGAGGAAGTGGTGCATCTGGTGAGGTGGGTGAACTCTGTGGTGAGAGAGGAGTGGACTGCGGAGGTGTTTGATGTTGAGTTGCTGAGATATTCAAATATTGAGGAAGAAATGGTAGAGATGTTGCAGATAGGGATGGCATGCGTGGTGAGGGTGCCAGAACGGAGACCAAAAATGCAAGATGTTGTGAGCATGTTGGAGGAAGTTCGTAAAGTGAATATCGGAACCCAATCATCCACAGAAGGTTCCACCCCAACCCCACAAGCAATTATTGATGTACCTTCTTCGTCTGTTCCAAAATAA 1662 0.4477 MNLLITLSAAFVIGVIFVSVDAEPVVDKKALLDFYRTIGQSHPLNWDENSSACNNWRGVFCNSEQSRVIALHLPGAGLSGPIPSNTLSRLSELQTLSLRFNRITGPFPSDFSELKNLSYVYLQFNKFSGPLPSDFSVWNNLNVIDLSNNSFNGSIPSSITNLTHLTSLVLANNSLSGEIPDLDIPRLKVLNLANNHLSGVVPKSLERFPGSAFSGNNNLTTENTLPPAIPLQPPNAHPRKKTTLSEPVLLAIIIGGCVLLFLVIATFMLIRSYQKADDEVPAVKSKKKEDSLKKEVSETESQDKNKIVFFEGRHIAFDLEDLLRSSAEGSVSALLHGRKGEGRASLDWDSRLRIAIGAARGMAHIHTQHGGKLVHGNLKASNVFLNSQGYGCVSDAGLATLTSSIPLLPQRNGGYRAPEVTDIRKASHAADVYSFGVLVLELLTGKSPIHAMGSEEVVHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVEMLQIGMACVVRVPERRPKMQDVVSMLEEVRKVNIGTQSSTEGSTPTPQAIIDVPSSSVPK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0920 553 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Lele26g0920 553 FunFam Probable inactive receptor kinase RLK902 24 183 - -
Lele26g0920 553 MobiDBLite consensus disorder prediction 527 553 - -
Lele26g0920 553 SUPERFAMILY Protein kinase-like (PK-like) 293 520 IPR011009 -
Lele26g0920 553 Gene3D Transferase(Phosphotransferase) domain 1 327 537 - -
Lele26g0920 553 Gene3D Ribonuclease Inhibitor 26 231 IPR032675 -
Lele26g0920 553 Pfam Protein tyrosine and serine/threonine kinase 325 518 IPR001245 GO:0004672|GO:0006468
Lele26g0920 553 ProSiteProfiles Protein kinase domain profile. 187 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0920 553 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 326 533 - -
Lele26g0920 553 SUPERFAMILY L domain-like 39 208 - -
Lele26g0920 553 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515
Lele26g0920 553 PANTHER OS05G0588300 PROTEIN 10 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0920 Lele-ChrLele26 5915629 5917599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0920 327 522 Receptor kinase-like Gene Family AT4G23740 65.152 2.05e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele26g0920 PK_Tyr_Ser-Thr 7.4e-19 CL0016