Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0916 ATGCCCTTCACAAGGGGTAAACTTACCAATATATATTCAGTACATTATATGGCCTTACAAATTGCACGATCGTCCCGCAGCATTCCTATCTTGAAGTACGTTTCTCAAGTAACTCCCTTACCAAATTCTTTACACTTACATCCTTCTCAAAACATGGAAGACAAGAGAGAGCTGACACTGAGCAGTGATGTTGCAGCTCACAGCTTCAGCTTCGACAAGAGAGTGGGGACCTCGAGTGGTGGAACTGTCATTCGCAAAACTAAATCATCTAGTGCTCAATTCTTGATCAACATTGATGGCCTAATCAATGATGTTGCAGGAAGCTTTCGTCAGATGGATTCCAAAGTTAATGGTTCCTCTAGCAAGGAATTAACATATTCCCTTTCATTCTCACGGGAACTCTCAGATGTCTTGAAGCTGCCAAGCCCCAACTGCAAAGATGGTGCATCTGATGTTTCTGCAAAAGACGAATCAGATTCATGCAAGTGCACAAGAATGCACATGGAACCCGCCTTGCCAATACATCTGAAGTTTGAAGATGTGAAATACAAGGTTCCAGAGAAAGGTGAGAAGTCTTCTGGAGAAGGGAAGTACATTCTTCATGGGATCACCGGCTCGGTTCGCCCAGGAGAGATTCTTGCTCTAATGGGACCATCAGGAGGTGGTAAAACAACATTGCTCAATGTCTTGAGCGGAAGGACCAAGTTTAATTGTGGTTCTATCACTTACAATGACAAACCATATACCAAGTCATTAAAGCAGAGGATTGGATATGTAACGCAAGATGATGTTGTGTTCCCTCATCTTACAGTCAAGGAAACTCTCACATATGTAGCTTTACTCCGTCTCTCGAAGGATCTGTCAATAACACAGAAAAAAGAGAGGGTTATGAATGTTTTAAGTGAACTATGCCTCGAAAGATGCCAAGATACAGCAATTGGTGGCAAATTCATTAGAGGAGTTTCTGGGGGTGAGAGAAAAAGGGTCTGCATTGGCACAGAAATCCTGCTCAACCCGTCACTTCTGTTCTTAGATGAACCAACATCTGGTCTAGATTCAACCACAGCGTCACGAATTGTTCGGATTCTTCTTAACATTGCCAAAGAGGGAAAGACAGTGGTGACAACAATACACCAGCCGTCAAGTAAGCTGTTCAGCATGTTTGACAGGTTGATTCTGTTGGGAAAAGGAAGTACCTTGTACTTTGGAAAAGCATCTGATGCAATGATGTATTTCTCCTCTATTGGTTGTTCTCCATTGATAGCCATGAACCCTGCAGAGTTCCTTATCGACCTTGCAAATGGCATCATGAATGACAAATCTGTCCCTTCAGAACTTGAAGATGAGTTCCAATATGGAATAAAAAAAATCAACATAAAAAACAACACACCCTCCCCAGTTGATGTACACGAGTTTCTAGTCAAGGCCTATGAAATAAGGCTTGCAAAAAGAGAGAAAGCAATGCTTCTCGAACCCATGACAGTAAGGGGAGATCAGAGTGGGATGCAAAGCAGGCCATTGCTGAGGGAATTTGGAGCAACTTGGTCTCAACAATTTTGCATTCTCTTCATGAGGGGCATTAGGGAGAGGCGTCATGAGTATTTCAGCTGGTTGCGTGTAACCCAAGTAATATCAACCGCAATCATTGTTGGACTACTTTGGTGTAGCCTTGGTTCTTCTTCTCCCAAGAGTCTCCATGATCAGGAGGGGCTACTGTTCTTCCTTTCAGTGTTCTGGGGCTTCTATCCTCTGTTTACTGCCATCTTCATGTTCCCACAAGAAAGAGCAATGCTAGTGAAAGAGAGATCGATTGACATGTATAAACTCAGTGCTTACTTCTTAGCTAAGAACACCAGTGATGTTCCAATGGAGCTTCTAATGCCTCCAGTGTTCATGGTGATTGTGTATTTCTTGGTTGGCTTGAAGCTACAATTTTCTGCATTTTTCCTCACCATTCTCACAATTTTTCTCAGTGTTCTAGCAGCTCAGGGTCTGGGACAAACCATAAGTGCAGCATTTCTAGATGTGAAGAAAGCTACAACACTAGCCTCAATCGTTGTCATGACCTTCATGCTAACTGGTGGATTCTTTAGCCAACAAGTTCCAAGGTTTATGTCATGGGTGCGATACGTCTCTTTCAACTACCACACTTACAGGTTGCTTTTGAAGATTCAATATGGCTGTGTGGGTTCGAGTTCTGCATCAGGTTGCAGTGAGTCTGCTTTAATGAAAAATAGTGAGGCTAAATTCGGGGGAGAACTGGAAGTTGGTGCAATGATAACAATGATTATTATTTATCGGCTTATAGCGTATTTATTGCTAAGGAGAATGAATATAAGGACTAATTGA 2349 0.424 MPFTRGKLTNIYSVHYMALQIARSSRSIPILKYVSQVTPLPNSLHLHPSQNMEDKRELTLSSDVAAHSFSFDKRVGTSSGGTVIRKTKSSSAQFLINIDGLINDVAGSFRQMDSKVNGSSSKELTYSLSFSRELSDVLKLPSPNCKDGASDVSAKDESDSCKCTRMHMEPALPIHLKFEDVKYKVPEKGEKSSGEGKYILHGITGSVRPGEILALMGPSGGGKTTLLNVLSGRTKFNCGSITYNDKPYTKSLKQRIGYVTQDDVVFPHLTVKETLTYVALLRLSKDLSITQKKERVMNVLSELCLERCQDTAIGGKFIRGVSGGERKRVCIGTEILLNPSLLFLDEPTSGLDSTTASRIVRILLNIAKEGKTVVTTIHQPSSKLFSMFDRLILLGKGSTLYFGKASDAMMYFSSIGCSPLIAMNPAEFLIDLANGIMNDKSVPSELEDEFQYGIKKINIKNNTPSPVDVHEFLVKAYEIRLAKREKAMLLEPMTVRGDQSGMQSRPLLREFGATWSQQFCILFMRGIRERRHEYFSWLRVTQVISTAIIVGLLWCSLGSSSPKSLHDQEGLLFFLSVFWGFYPLFTAIFMFPQERAMLVKERSIDMYKLSAYFLAKNTSDVPMELLMPPVFMVIVYFLVGLKLQFSAFFLTILTIFLSVLAAQGLGQTISAAFLDVKKATTLASIVVMTFMLTGGFFSQQVPRFMSWVRYVSFNYHTYRLLLKIQYGCVGSSSASGCSESALMKNSEAKFGGELEVGAMITMIIIYRLIAYLLLRRMNIRTN 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0916 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 409 IPR027417 -
Lele26g0916 782 Pfam ABC transporter 200 349 IPR003439 GO:0005524
Lele26g0916 782 ProSitePatterns ABC transporters family signature. 321 335 IPR017871 GO:0005524|GO:0016887
Lele26g0916 782 Pfam ABC-2 type transporter 378 443 IPR043926 GO:0140359
Lele26g0916 782 CDD ABCG_EPDR 173 403 - -
Lele26g0916 782 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 176 421 IPR003439 GO:0005524
Lele26g0916 782 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 156 771 - -
Lele26g0916 782 SMART AAA_5 209 398 IPR003593 -
Lele26g0916 782 Pfam ABC-2 type transporter 517 726 IPR013525 GO:0016020|GO:0140359
Lele26g0916 782 FunFam ABC transporter G family member 22 187 415 - -
Lele26g0916 782 Gene3D - 175 414 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0916 Lele-ChrLele26 5893674 5896918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0916 199 403 Calmodulin-binding Proteins AT2G36910 30.000 1.00e-14 76.6