Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0911 ATGGTGGTTCCTAAACTATCCTACGAGGAGAGCCGCCGCAAAAGATTGGAGGAGAACAAGAAGCGAATCGAGGCCCTTAATTTGCCCCAGCTTTCTCAAGCCCTCCGAAATTCTCCTTCTCCCAAACCCTCCCCTATGAAGCACACCAAACCTCTCTCAACGGAAAAACAGATTGTTGTTGTAAGGAGGTCTGGTCGTGTCGCAAACAGGCCCGCTCCTGTTTACAAAGAAGTGCTTATTGATCGCGTGGCCATACCTAGAAGAGTTTATGGGACCCGAAGAAATTTATCAAACTGCGTACATGGTTCGGAGGAAGCCAGGGAGGAAGCTTTTGGAAAAGCAGAGAAGCTACTCTCGGCTTTAGAATCTGAATATCCGACATTCATAAAGTCAATGCTTCCTTCGCATGTAAGCGGGGGGTTTTGGCTGGGTCTTTCAGTCCAGTTCTGCAAGAGTAACCTTCCAAAGCGGGACGAAATGATTACTTTGATAGATGAAGATGGGGATGAGTATCCCACAGTGTATTTGGCTCGTAAAACTGGACTCAGCGGTGGATGGAAAGGTTTTGCGGTTGCTCATAACCTTGCTGATGGGGACGCATTAGTTTTTCAGTTAGTCAGACCTACGGCATTCAAGAGTGAAGAGTCCTGCTCCTGCAGAGGGCAATTAGCTGTAAATGAATTGCACTTGGAGCTTTTTGAATCAATCAAGCGATTAATCCCTAATGGTATGGGTCTAAAAGGGCATAGTAGCTTAGAGGAGGCTGCGCGTGTTGTTAATGGGACGCATTGGTCAGGGCATGGGCATTTCCCAGGGATGCATGACCCAGGCTTTGTCAAAACTGATAAAGATGTTCAAGAGAAAGGACAAAAATCAGGAACAACAGTAACCTTTGTGATTATTGAAGGATGGGTTGTTACAGTTGCATCAGTTGGGGATTCCCGTTGCATACTTGAGCCTTCTGAAGGTGGGATATATTACTTGTCAGCAGAGGAGAGGGTGCGTATAACCGCTAGCGGATGTGAGGTTGGTCGTCTAAATACTGGTGGAGGTGCACAGGTTGGTCCTTTGAGGTGTTGGCCTGGCGGCTTGTGTCTTTCAAGATCCATTGGTGATATGGATATTAGTGGATATATTGTTCCTGTACCGTATGTGAAGCAAGTGAAGCTGCCCACTGCTGGAGGCAGGCTTATTATCTGCAGCGATGGTGTTTGGGATGCTTTGACTGCAGAACCAGCCCTTGATTGTTGTCGTGGCATGACAGCAGATGTTGCAGCATCCCTTCTTGTTAGAGAAGCTTTACAAGCGAAGGGACTTAGAGATGATACTACCTGCATTGTAGGTGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTGCAACAAACGAAGGCAGGAAAAATGTTCAAGGCAATGAGATCAAACCTGGAGAGGGTATTCCAATCCATGCAGGTGTTGGAAGGAAAACGCGCCCTGGGACGGACCTTTTCTTTGTTTAAGTTGCCAGGAGAAGAAAGAAGCAATGGAAGAGAAAAGAACATCAGGTTTTCAATCAGCTCAACTCTTCTATTTACCTATCTGTCTGGAGATTCATTTGTCCATAACCCTTTTGATTTTTCGCTTTCAGATAGACTGAGCAGTGGAAGTGACTGA 1653 0.4634 MVVPKLSYEESRRKRLEENKKRIEALNLPQLSQALRNSPSPKPSPMKHTKPLSTEKQIVVVRRSGRVANRPAPVYKEVLIDRVAIPRRVYGTRRNLSNCVHGSEEAREEAFGKAEKLLSALESEYPTFIKSMLPSHVSGGFWLGLSVQFCKSNLPKRDEMITLIDEDGDEYPTVYLARKTGLSGGWKGFAVAHNLADGDALVFQLVRPTAFKSEESCSCRGQLAVNELHLELFESIKRLIPNGMGLKGHSSLEEAARVVNGTHWSGHGHFPGMHDPGFVKTDKDVQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGIYYLSAEERVRITASGCEVGRLNTGGGAQVGPLRCWPGGLCLSRSIGDMDISGYIVPVPYVKQVKLPTAGGRLIICSDGVWDALTAEPALDCCRGMTADVAASLLVREALQAKGLRDDTTCIVGDILPQEKPPAPVQQTKAGKMFKAMRSNLERVFQSMQVLEGKRALGRTFSLFKLPGEERSNGREKNIRFSISSTLLFTYLSGDSFVHNPFDFSLSDRLSSGSD 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0911 550 Coils Coil 6 26 - -
Lele26g0911 550 Pfam Protein phosphatase 2C 283 434 IPR001932 -
Lele26g0911 550 Gene3D - 218 456 IPR036457 -
Lele26g0911 550 SMART PP2C_4 136 448 IPR001932 -
Lele26g0911 550 CDD B3_DNA 126 209 IPR003340 GO:0003677
Lele26g0911 550 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Lele26g0911 550 MobiDBLite consensus disorder prediction 20 53 - -
Lele26g0911 550 Pfam B3 DNA binding domain 128 209 IPR003340 GO:0003677
Lele26g0911 550 Gene3D - 103 214 IPR015300 -
Lele26g0911 550 SUPERFAMILY PP2C-like 267 447 IPR036457 -
Lele26g0911 550 SUPERFAMILY DNA-binding pseudobarrel domain 121 211 IPR015300 -
Lele26g0911 550 CDD PP2Cc 277 447 IPR001932 -
Lele26g0911 550 ProSiteProfiles PPM-type phosphatase domain profile. 229 450 IPR001932 -
Lele26g0911 550 SMART B3_2 128 214 IPR003340 GO:0003677
Lele26g0911 550 PANTHER PROTEIN PHOSPHATASE 277 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0911 Lele-ChrLele26 5854088 5862449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0911 277 487 PP2C-type Phosphatase Gene Family AT1G47380 65.368 2.09e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele26g0911 PP2C 6e-17 CL0238