Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0909 ATGCAAGTGGTGGGGAGGCTAGGCAGCTACATTAGTCGTGGGGTATCAACGGTGTCAGGCACCGTTCGTCCCCTTGGTGGCGCTGTAGATATAGTTTTAGTTGAACAGCAAGATGGGAGCTTCAAGTCGTCGCCTTGGTACGTCCGATTTGGGAAATCCCATGGCGTTTTAAGGACAGAAGAGAGGATGATCAGCATTAATGTCAATGGAGAGGAAGCAAATTTCCATATGTATATGGATCATAAAGGGCAAGCCTTCTTTCTCAGGGAGGTCGAAGCGGAAGAGGGAGAATCTACGTTGTATCCATTATCTTCTGGGGATGAGACAGATATTCTGGATAAGCGGCATTTGAAGTCCAGAAGTTTTAGTTTCGAAGACAAATCAGATTATATGGCTCAGGGCGATATGGACACAGGAAATATGCTGGCCAGAACTACTTCTGACGGATCAATGACAAGTGGGCTTTTCATTGCCGATAATAATTTTCAGCGGGAGGTTCTCAATGCAGATATGAACAATGCACGTTCATTGGAGTGTGCTGAGCTTGCAGCCAACCTGTTGGAGGTAAAGTGGTCTACCAATCTTGCTGGTCATAAACCGCCTCGAAAAGATCGTGTAAAATTTCAAAAGAGAAAATCTCAGCGTGATAACATGGAGAATTCTTCAGACCAACGTAGATTCTATGATGAAGCTTGTTCCCTTAATGTGCAAGACGGCATCTGTTCCAACCCAGACCTTGAAGTTCCTGGAGGACTTGATGAGGATAACGGTATATGCTCATCATGTTCAAGCACCACGGTTGAAGTTAGCTTTTCAAAACAGAAAACTGAAGTGATAACTGAACTACCAATGAGTGGTGATATTGCAGAGGACACTGATGGAGTTCAGCCACTAGTTTATAGTGAAATGTCAAAGAGTTCAATTGGATGCATGCATTGTACCACAGAACAAACTCATGAGGTGTTTTACCTTGATAACAAAATAGGTGAAGCACATACTCATGCAGAGATTTTACAAGCGGCAACAGTACTACCTGAGGTTACAAAAAATGAGGAAGTCACCAAAAATGCTGATGTCATGATGCCTGTCATGATGGTTTCTAAGACTTCTCAGCAAGCAAATTGTGCTCATCCTGGCATTAGCAAGTCTACTGTGGCAGATATTGAAGACCAAACAGCACTGCCAAAAATTCAAACGATCAATCTGGATATTGGACTTTGTTCAGCTGAGAAGGATGGATCAAAATGTGTTGCTGCTACTCCACAGGACTCAGCATGCAATATCTTGAAGCATCCATCATTTGGGAAAGATGATGTGAAATGTCTGAAACCAGATGACCAATTATTAACTGAGGAGTCAGCAATTGCTGTTGGTAGTTTGCTGTGCTTTACACAGATATCTGTTTGTAAGCATTTGCTATATGAAGGAATGGGAGCTGATGCTACTTCTAAAGCGTTTTGTGCCTCTTCAGCACAAAAACCTTCCCCCAGTGGAAACTGGAAGCTTTGGCCTTTCTCTTTCACGAGATTAAGTTCTGAAAAGGCCGTGGTGCCTGCTGCTGATGACAAAGTAACTAATGCTTCAGAGAGTTCAATCAACAAAGATGCAGGCAAAAATGAGCTCAAACCTAAGCTAATGAAAAAGAAGGTCAGGGTAAAGACACCAACAGCTGAACAGCTGGCATCCTTGAATCTAAAGGAAGGGAGGAACACCGTAACCTTCACCTTCAGTTTCTCTATAGATACGCTGGAGAATGAACAGATTGATGCCCAAATATTTTTATGGAAATGGGACAATCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAAGTCAGACGTTCTAGGTCAGGTCATGCCTTTAGTTGGAGTAGACTGGTCCCAGACAGGTGTTGCACATTTATTCTCAGCTATCAAGGAAAATGGCTACAAACTACTTTTTCTCAGTGCTCGATCAATTTCTCAGGCCTATCAAACCAGACAATTCCTGGTTAATCTTAAGCAGGTGGTGATGTTTAGAAGTCAAACATCGGATATCAAGGCACTTTTTCCTCCTGAAAGCAACCCATTTTATGCTGGCTTTGGAAATAGAGATACTGATGAGATCAGCTACCTCAAAGTTGGAATCCCAAGAGGGAAAATCTTCATTATTAATCCAAAGGGAGAGATTGTTGTGAACCGCCAACATGACACAAAATCTTATTCTTCGCTTCATACCCTCGTGAATGGGATGTTCCCTCCTGCTACGAATACGAACACATCTGAGCAGGAGGATTTTAATTCATGGAATTACTGGAAGGTGCCTCTTCAAGAATTACTTAGGTGTAAATTTGTACACCAGCATTATAAACTTTTGTTGACAAATTCAGGTGATCTGTGTGGTAGCGAAGATTCTCATTCTGTACATAACATGTACCAGATGGATTGA 2430 0.4222 MQVVGRLGSYISRGVSTVSGTVRPLGGAVDIVLVEQQDGSFKSSPWYVRFGKSHGVLRTEERMISINVNGEEANFHMYMDHKGQAFFLREVEAEEGESTLYPLSSGDETDILDKRHLKSRSFSFEDKSDYMAQGDMDTGNMLARTTSDGSMTSGLFIADNNFQREVLNADMNNARSLECAELAANLLEVKWSTNLAGHKPPRKDRVKFQKRKSQRDNMENSSDQRRFYDEACSLNVQDGICSNPDLEVPGGLDEDNGICSSCSSTTVEVSFSKQKTEVITELPMSGDIAEDTDGVQPLVYSEMSKSSIGCMHCTTEQTHEVFYLDNKIGEAHTHAEILQAATVLPEVTKNEEVTKNADVMMPVMMVSKTSQQANCAHPGISKSTVADIEDQTALPKIQTINLDIGLCSAEKDGSKCVAATPQDSACNILKHPSFGKDDVKCLKPDDQLLTEESAIAVGSLLCFTQISVCKHLLYEGMGADATSKAFCASSAQKPSPSGNWKLWPFSFTRLSSEKAVVPAADDKVTNASESSINKDAGKNELKPKLMKKKVRVKTPTAEQLASLNLKEGRNTVTFTFSFSIDTLENEQIDAQIFLWKWDNRIVISDVDGTITKSDVLGQVMPLVGVDWSQTGVAHLFSAIKENGYKLLFLSARSISQAYQTRQFLVNLKQVVMFRSQTSDIKALFPPESNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEIVVNRQHDTKSYSSLHTLVNGMFPPATNTNTSEQEDFNSWNYWKVPLQELLRCKFVHQHYKLLLTNSGDLCGSEDSHSVHNMYQMD 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0909 809 PANTHER LIPIN 494 669 IPR026058 -
Lele26g0909 809 Pfam LNS2 (Lipin/Ned1/Smp2) 554 669 IPR013209 -
Lele26g0909 809 Pfam LNS2 (Lipin/Ned1/Smp2) 675 747 IPR013209 -
Lele26g0909 809 Pfam lipin, N-terminal conserved region 1 97 IPR007651 -
Lele26g0909 809 MobiDBLite consensus disorder prediction 198 224 - -
Lele26g0909 809 SUPERFAMILY HAD-like 594 714 IPR036412 -
Lele26g0909 809 SMART lns2 601 727 IPR031315 -
Lele26g0909 809 MobiDBLite consensus disorder prediction 210 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0909 Lele-ChrLele26 5842400 5847919 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0909 26 5842400 5847919 Lele01g0863 01 4980702 4986524 CCT
Lele26g0909 26 5842400 5847919 Lele02g0845 02 5133019 5139505 CCT
Lele26g0909 26 5842400 5847919 Lele03g0858 03 5001231 5007770 CCT
Lele26g0909 26 5842400 5847919 Lele04g0862 04 5271318 5277665 CCT
Lele01g0873 01 5041698 5044831 Lele26g0909 26 5842400 5847919 CCT
Lele03g0869 03 5063928 5067063 Lele26g0909 26 5842400 5847919 CCT
Lele26g0909 26 5842400 5847919 Lele27g1175 27 18904952 18911556 hybridization
Lele26g0909 26 5842400 5847919 Lele28g0891 28 5749654 5755111 hybridization