LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g0895	ATGGAAGACACGAGTCTTTTCTCACTGAACTACAGGATGGACACCGCCGATTCGGAATGCTATGGCCCTTCCATCGAAGCTCTTGGTTCTCTCTTCAAGCTCACCCAAGTCTTCCTATGGGACGATAGCGCGCAGGTTTCATCATCAGCAGAGCGTTCTAGACCGGCTGAAGCTGATGATGATAAAGGTTTACATTTCGTTCCTACAACTGAAGATATGGAATTTACAAGGCAGATGAGTGCATTGGGGCTTCCTCTTTCCTTTCACACAAATAAGGAGAGAAATGGACAACCAAAAGGCAAAAGAAAGGGTAAACGTAGTCATCAAAATCCAGTAGATGAAGCACTTTCCAGATTAAATGTAGAGGAGGTTGTATCTCCTGACATTTATTATGATAATACAAGTGATTCTTTATCATGTATATCAATGCTGGGTGAAAGAAAATCATGTCGTTGTGATGGTTCAGTGGGTGTTGATAAATCTCAATGTGTCTCTGGTGAAGGTGACAATGCAGCAATTTATACTGGTGTTTTGTCTGATGTTATCAGGGAGCAAAATGATGATGACAAAAATGAGGATGTGACTGATGGCGCTCAGGGTGGCGACTTATTAATTAGAGATACTTTTTTAAGTGATGATTTGAAAGCTGCATCAAGTTCACCTGTTGGATCTTCTGCTGGAGGTGAAGGCAGCTTGACAGTTTCTGGTGTCAACCTTTGCGGAATAGAAGATGGTAAACAGTTGATTGATCATAAACGCTTGGAAGTTTCATCAGTTGTTTGCAAAGATGCAGAACATGAGACCTTTTGCAATGGTGACAGTGTTATTTCGCAGCCAATGACTCATGAATCAGATTCTTTTCCTATAAGTTCAGAAGGGATTGGACGTAACAGGATTGCTGACTCAAGTGACTGCGGTGAACTTGGGGAATGGATGGTGTATTGGGATACTTTCTATGAGAGAAACTACTTTTATAATACCAGAGCACAAGTATCCACATGGCACCCACCCCCAGGGATGGAACACCTAGCAATTGGTGGTTGTACAGAAATAGAAAATGGTGCCACTGTAGAAGCAACAGGGGAGCATGGTTCTCAGAACAAGACTAACCCCCATGAGGAAACTTTGATTGTAGAGAAATTAGCTAAACAAGATTTGTGTTCAACTGACATTGGATTTACTTCTGACAATATGATCTCTGATATCAGTATACATAGTGAAGGCCAGTCCTTTGAATGGATTGAGAGTAGTAGTTGTGATGATGGAGTTTCATTCTGCTCAATGTCAGATGCCCTGGATTGTAACATCAGCTCTCACAAAAGATTCCCCAAGCCAACTTTAGAGGGTAATGACACATGCTTGGATATCCCCGTTCCTGTTGTGAATGGGTTGCATGCTAAATCTGATCCTTCCATGAAAATACAGGAAATGAAAGTGAAAAGAAAACCAAGACAGAAAAGATTGTATAATGAAACTAAAGTTAATCGTTGCTGCATATTTGATCTACTGATTTTTCATTTTGCAGGTCGCCAATGTCAAGAATTGCATGAAGAGTATTCTGCTGCTATTGGCAAATATTGGCATCAAAGATATAGTTTATTTTCTAGATTTGATCACGGTATAAAAATGGACGAGGAAGGATGGTTTTCTGTCACTCCAGAGCCTATTGCTCAGCATCATGCATTACGTTGTGCTTGTGGAGTCATAGTTGATTGTTTCACAGGTGTTGGTGGAAATGCCATCCAATTTGCACAATGGTGCAGACATGTGATAGCAATTGATATCGATCCAAGGAAGATTGATTATGCAACGCATAATGCTGCTATCTATGGAGTGGGTGATCAAATTGACTTCATTATAGGAGACTTTTTCCTTTTGGCACCGAAGTTAAAGGCTGATACTGTTTTCTTATCTCCTCCTTGGGGGGGACCTGGTTATGCTAAAGTCATGACGTATGACATGAAGACGATGCTTAAACCACATGATGGATATGTTCTCTTCAGAGCTGCAAAGGAAATTGCATCTAGAGTTGTCATGTTCCTGCCAAGAAATATAGACTTGAACCAATTGGCAGAATTATCTCTATCTGCCAGTCCCCCATGGTCTTTAGAGGTGGAGAAAGTCTTTTTGAATGGTAAACTGAAGGCAGTTACTGCTTACTTCAGCGATACAACAGTTGGAGGATGCTGA	2190	0.4096	MEDTSLFSLNYRMDTADSECYGPSIEALGSLFKLTQVFLWDDSAQVSSSAERSRPAEADDDKGLHFVPTTEDMEFTRQMSALGLPLSFHTNKERNGQPKGKRKGKRSHQNPVDEALSRLNVEEVVSPDIYYDNTSDSLSCISMLGERKSCRCDGSVGVDKSQCVSGEGDNAAIYTGVLSDVIREQNDDDKNEDVTDGAQGGDLLIRDTFLSDDLKAASSSPVGSSAGGEGSLTVSGVNLCGIEDGKQLIDHKRLEVSSVVCKDAEHETFCNGDSVISQPMTHESDSFPISSEGIGRNRIADSSDCGELGEWMVYWDTFYERNYFYNTRAQVSTWHPPPGMEHLAIGGCTEIENGATVEATGEHGSQNKTNPHEETLIVEKLAKQDLCSTDIGFTSDNMISDISIHSEGQSFEWIESSSCDDGVSFCSMSDALDCNISSHKRFPKPTLEGNDTCLDIPVPVVNGLHAKSDPSMKIQEMKVKRKPRQKRLYNETKVNRCCIFDLLIFHFAGRQCQELHEEYSAAIGKYWHQRYSLFSRFDHGIKMDEEGWFSVTPEPIAQHHALRCACGVIVDCFTGVGGNAIQFAQWCRHVIAIDIDPRKIDYATHNAAIYGVGDQIDFIIGDFFLLAPKLKADTVFLSPPWGGPGYAKVMTYDMKTMLKPHDGYVLFRAAKEIASRVVMFLPRNIDLNQLAELSLSASPPWSLEVEKVFLNGKLKAVTAYFSDTTVGGC	729

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g0895	729	FunFam	S-adenosyl-L-methionine-dependent methyltransferase superfamily protein	518	725	-	-
	Lele26g0895	729	Pfam	RNA cap guanine-N2 methyltransferase	567	722	IPR019012	GO:0001510\|GO:0008168\|GO:0009452
	Lele26g0895	729	PANTHER	S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED	69	724	-	-
	Lele26g0895	729	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	517	686	IPR029063	-
	Lele26g0895	729	CDD	AdoMet_MTases	569	640	-	-
	Lele26g0895	729	ProSitePatterns	WW/rsp5/WWP domain signature.	311	337	IPR001202	GO:0005515
	Lele26g0895	729	Gene3D	Vaccinia Virus protein VP39	516	726	IPR029063	-
	Lele26g0895	729	MobiDBLite	consensus disorder prediction	86	113	-	-
	Lele26g0895	729	Gene3D	-	298	347	-	-
	Lele26g0895	729	ProSiteProfiles	WW/rsp5/WWP domain profile.	311	339	IPR001202	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g0895	Lele-ChrLele26	5741552	5746898	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele26g0895	26	5741552	5746898	Lele27g1194	27	19005723	19010961	hybridization
	Lele26g0895	26	5741552	5746898	Lele28g0878	28	5672469	5675664	hybridization