Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0892 ATGAACAGCGAAGACCTGTTTAAGTCATCCGCCTCGGACCAGGACAATCAGATGGAGACGATCATGACGATGATGCAACTTCCTGAATTATCTGGAGCTTACAGCAATGGCGTCGTTTCCGATGACTTTATACTGCATGAGCTCTCCCCTGCCGCTAATAGGACGACGGACACCGACATACACGGAACTATGCTGTATTTTTTGGACAACTCTCCTGTGACGTCCTCGTCGTTGTCATTAACAAGTTTACAGTCTGCTACAATTTCCTTTACTGACCCTACTCCGATGATTCAAGAGCAAGATCCAGCAGCTTGCGGTAGAGCATCGGAGAAAGGGATGTCAATGGCGGCGATGAGGGAGATGATATTCAGGATAGCGGTGATGCAGCCGATACACATAGACCCTGAGTCGGTGAAGGCACCGAAGCGGAGGAACGTGAAGATTTCGAAGGATCCTCAGAGCGTGGCTGCTCGCCACCGCAGAGAGAGGATCAGCGAGAGAATAAGGATTCTGCAGAGACTGGTTCCGGGAGGGACGAAGATGGACACAGCTTCCATGTTAGACGAAGCCATTCACTATGTGAAGTTTCTCAGGACTCAGGTTCAGTCACTGGAACGGGCTGCAGCGACTAAGCCTCCTGGGATAGGATTCCCTGTGTCAATGTCCACTGCATCTTCCACCTCGTATCTTCCTATCCCATCAAAGCCTCACCTATTTCCTACTCAGAATCTTCCTAATTTCGGAGATAAGGAATAA 756 0.496 MNSEDLFKSSASDQDNQMETIMTMMQLPELSGAYSNGVVSDDFILHELSPAANRTTDTDIHGTMLYFLDNSPVTSSSLSLTSLQSATISFTDPTPMIQEQDPAACGRASEKGMSMAAMREMIFRIAVMQPIHIDPESVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLRTQVQSLERAAATKPPGIGFPVSMSTASSTSYLPIPSKPHLFPTQNLPNFGDKE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0892 251 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 208 IPR036638 GO:0046983
Lele26g0892 251 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Lele26g0892 251 Pfam Helix-loop-helix DNA-binding domain 158 197 IPR011598 GO:0046983
Lele26g0892 251 Gene3D - 147 211 IPR036638 GO:0046983
Lele26g0892 251 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 49 228 IPR045843 GO:0003700|GO:0006355
Lele26g0892 251 SMART finulus 154 203 IPR011598 GO:0046983
Lele26g0892 251 FunFam BHLH transcription factor 151 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0892 Lele-ChrLele26 5723309 5724064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0892 102 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 79.825 1.08e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele26g0892 HLH 1.6e-06 No_clan