Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0891 ATGTATAATAATGGAGGTGGGAAAGCTGTGAAGACTTTTGAGCTATTCCACTTGCGTCCTGATTTCTCCGACTTGTTGTCTTCTTCAATGGCTCTGTTGTTGGACAATTGTGAGAGCATTTTACTGTCTTTAGACTCCCACAAATCGGTTCCGGCTCCTTTCCTCACCAAGACTTACCAGCTGGTGGATGATCCCGCCACCGATCACATTGTTTCTTGGGGCGAAGAGGACACCACCTTCGTCGTTTGGCGTCCTCCTGAGAAGATCGTACCGGACAGATGGGAGTTCGCCAATGAGTTCTTTAGGAAGGGAGAGAAGCATTTACTGTGCGAGATCCATAGAAGAAAAACGGCTCAGCTTCATAGCCAGCATCTACCCGTTAATCATCCTTATCATCATCACCCGCCACTTCCGTTGGGACTCAACGTTCCTGCTTTCTTTCCCTTCTCGAGCGCCAAAATCAGCGTCTCTCCTTCCAACGACTCCGATGACCAACCGCCCCATTGGTGTGACTCGCCACCGCTCACTTCCCCATGCGGAGGCACTGGCATGGTGACGCTGTCCGAGGACAACCAAAGACTCAGAAGAAGCAACAGCATGCTCATGTCCGAGCTGGCCCACTTGAAAAAACTCTATAACGACATCATCTATTTCGTCCAGAATCATGTCAAGCCCGTGGCTCCCAGAAATTCTTTCTCTTCCTCTTTTCTCCTACCTAATACATGTTCACCATCACCGCCCTCTCCTTTGCCTCCTGCCGCTACAAACTTTTCCATGGTCCAAAGGCAAATGAACCAGCTTCTGGGCTATTATTCTACTTCTGCTAACCCTAAGCAAACTACCCCTCAAGTATCTCGTATCGTGAGATCTCCCACGACCTACACATCAAAAAGTTCCTTCGCCATTGTGGAAGAACCCTGCAGCACTAATACCAAGCTTTTTGGTGTGTCCCTTCAATCCAAGAAAAGGGTGCATCCTGAATCTGATTCTATTGCTCCGGCCAATTCCGAAACGAACAAGGCTCGATTGGTCTTGGAAAAAGATGATGACCTCGCCTTGAATCTCATGCCACCTTCGGCGTGTTAG 1086 0.489 MYNNGGGKAVKTFELFHLRPDFSDLLSSSMALLLDNCESILLSLDSHKSVPAPFLTKTYQLVDDPATDHIVSWGEEDTTFVVWRPPEKIVPDRWEFANEFFRKGEKHLLCEIHRRKTAQLHSQHLPVNHPYHHHPPLPLGLNVPAFFPFSSAKISVSPSNDSDDQPPHWCDSPPLTSPCGGTGMVTLSEDNQRLRRSNSMLMSELAHLKKLYNDIIYFVQNHVKPVAPRNSFSSSFLLPNTCSPSPPSPLPPAATNFSMVQRQMNQLLGYYSTSANPKQTTPQVSRIVRSPTTYTSKSSFAIVEEPCSTNTKLFGVSLQSKKRVHPESDSIAPANSETNKARLVLEKDDDLALNLMPPSAC 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0891 361 SUPERFAMILY "Winged helix" DNA-binding domain 51 115 IPR036390 -
Lele26g0891 361 Pfam HSF-type DNA-binding 54 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele26g0891 361 SMART hsfneu3 50 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele26g0891 361 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 88 275 IPR027725 -
Lele26g0891 361 Gene3D - 46 90 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0891 Lele-ChrLele26 5716717 5719177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0891 30 360 HSF AT1G46264 44.615 7.00e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele26g0891 HSF_DNA-bind 5.1e-05 CL0123