Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0880 ATGGGAAGCATGAAGGTCCATCACTTGTCACGTTCACTCTGGGAGCACGAACCCTCTCCCTCCCTCTCCCTCGGCTGCAAACGCCTTCGTCCTCTCGCCCCCAAGCTCCCCTCCTCCCCCACCTCTCCCAGCACTCCTCTCCCTCCCTTCGACCTCAAGACCTTCATCCGCCCCGACAGCGGCCCCCGAAAACCCTCCGACAACTCTCACAAAGACTCAGCTTCCCAGGTGGAAACGCACCAGGGCGGGATGAGATGGAATCCGACGCAGGAGCAGATAGGGATATTGGAGATGCTTTACCGAGGAGGGATGCGAACGCCGAATGCTCAGCAGATAGAGCAGATCACGGCTCAGCTTGGCAAGTATGGAAAGATTGAAGGCAAGAATGTCTTCTATTGGTTCCAAAACCACAAGGCACGCGAGAGGCAAAAGCAGAAACGCAATAGTCTTGGCCTCTCTCATCACAGTCCCAGATCTACTACCACTATGACTTTTGACGCAAGGCTGTTGAGAGCTTCCAAGAACAAAGCAGGTCGTTGTCGTCGTCGTCGTGTAAAGAGGAACAACAACACACAACTCTGGAGCTTTTCCCGTTGCACCCGGAAGGCAGATGAAGGGGTTTCATCATTTATCCACCATGTTCTCTGCAACCTGCTGCAGCTTTTGTAA 669 0.5396 MGSMKVHHLSRSLWEHEPSPSLSLGCKRLRPLAPKLPSSPTSPSTPLPPFDLKTFIRPDSGPRKPSDNSHKDSASQVETHQGGMRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHHSPRSTTTMTFDARLLRASKNKAGRCRRRRVKRNNNTQLWSFSRCTRKADEGVSSFIHHVLCNLLQLL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0880 222 MobiDBLite consensus disorder prediction 1 88 - -
Lele26g0880 222 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 201 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lele26g0880 222 MobiDBLite consensus disorder prediction 57 74 - -
Lele26g0880 222 CDD homeodomain 85 145 IPR001356 GO:0003677
Lele26g0880 222 Pfam Homeodomain 84 143 IPR001356 GO:0003677
Lele26g0880 222 SMART HOX_1 81 148 IPR001356 GO:0003677
Lele26g0880 222 FunFam WUSCHEL-related homeobox 4 83 150 - -
Lele26g0880 222 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Lele26g0880 222 SUPERFAMILY Homeodomain-like 79 149 IPR009057 -
Lele26g0880 222 Gene3D - 83 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0880 Lele-ChrLele26 5636767 5637708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0880 4 161 Wox Gene Family AT1G46480 66.272 3.32e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele26g0880 Homeodomain 6.9e-19 CL0123