LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g0871	ATGGCTGTTGAGCTTATATCGGGTTATGGGGATGATAGTTTTGCAGGCCTGACGGAAGTAGACAACACGATCGTGGTGCAGGAAGCTACGGCAGCGGGCATTCACAGCGTCGAGAAGCTCATGAAAATAATTTCTCAGCAGCGCCAGCACCAAGAGGAGGAGGCTTCTAGCTCCCGAGGAGGGCCTTCGGAACTGGAAGTTCTGGCAGATACGGCAATGAACAAGTTCAAAAGGGTCATTTCTCTCTTGGGCAGGCCAAGAATCGGCCACGCTCGTTTCAGAAGAGCTCCTACGACGCAGGCTTCGATTCCTTTTGTCCAGCCGCAGCAGACTCTGGATTCCGAAACCCCAGTGCCTCCTGTTACAGCACGCCAACAGAACAAAACAGAACAACCCTCTGCTTTTAAGGTCTATTACCCTACGCCGGTTTTACGTCTCCCGCCTCTGCCTCACCAGGCGCACCAACCTTCCCCCTTTCATCGGGTGGAGAAGAAGGAGGCGAACGTCAGTGTCCAATTTTCGGCGTCGCCAACAGTTTCCGCCGCCACTTCGTATATGTCTGCGTTAACAGGGGATACTGATAGTATGCAACGCTCTTGTCATTCTTCGGGGTTTCAAATCATCCACAGTCAGAGATCACAGCAGGGATCCTACATGGGCAAGCCACCTTTGTGTTCGAGTTCTTTAAAGAGGAAGTGCAATTCAATGGATGATGCCGGTCTCAAGTGCGGATCATCCTCTGGTCGCTGCCATTGCTCCAAGAAAAGGAGATCAAAGATAAGGAGAGTGATCAGAGTACCAGCAATCAGCTCAAAGATGGCTGATATTCCGGATGATGAATATTCGTGGAGAAAATATGGACAAAAGCCCATCAAGGGTTCTCCTCACCCAAGGGGTTATTACAAGTGTAGCAGCGTGAGAGGCTGCCCGGCTCGCAAACACGTGGAGCGTGCTCTGGACGATCCCAGCATGCTCATTGTCACCTACGAAGCTGATCATAATCACTCGCTTGAGGTTGCAGCCGCCGTCGTCCTCGAATCATCCTAG	1047	0.5167	MAVELISGYGDDSFAGLTEVDNTIVVQEATAAGIHSVEKLMKIISQQRQHQEEEASSSRGGPSELEVLADTAMNKFKRVISLLGRPRIGHARFRRAPTTQASIPFVQPQQTLDSETPVPPVTARQQNKTEQPSAFKVYYPTPVLRLPPLPHQAHQPSPFHRVEKKEANVSVQFSASPTVSAATSYMSALTGDTDSMQRSCHSSGFQIIHSQRSQQGSYMGKPPLCSSSLKRKCNSMDDAGLKCGSSSGRCHCSKKRRSKIRRVIRVPAISSKMADIPDDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLIVTYEADHNHSLEVAAAVVLESS	348

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g0871	348	ProSiteProfiles	WRKY domain profile.	272	338	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g0871	348	SUPERFAMILY	WRKY DNA-binding domain	274	336	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g0871	348	MobiDBLite	consensus disorder prediction	109	130	-	-
	Lele26g0871	348	FunFam	WRKY transcription factor 65	261	338	-	-
	Lele26g0871	348	Pfam	WRKY DNA -binding domain	278	335	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g0871	348	Gene3D	WRKY domain	264	337	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g0871	348	SMART	WRKY_cls	277	337	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g0871	348	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	26	338	IPR044810	GO:0003700
	Lele26g0871	348	Pfam	Plant zinc cluster domain	230	275	IPR018872	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g0871	Lele-ChrLele26	5567513	5568821	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele26g0871	1	298	WRKY Transcription Factor Family	AT4G24240	43.827	2.05e-71	223

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele26g0871		WRKY	1.2e-25	CL0274