Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0813 ATGCTGCTTCACCAGAGGAACTCTTTGCTGAGATCTAATACTTCTCCCTTTTCCGATTCTCAAATGCTTACTTTCTCTTCTCCCAAATCGGAGCCTCAGTTAATGGACAAGGCCTCCCCGAATGCCGCATTGCCCTTTCCGTATCACCAACTAGCTGCTTACACTAGGAATACAGGTTACGGCTCTGGAGGCATGCACGGGGTTTTAACAACAACCAGAGGGCCGTTCACTCCGTACCAGTGGATGGAGCTGGAACACCAGGCCTTGATCTACAAGTACATCACTGCAAATATGGCCGTACCTTCTCATCTACTCATCCCTATCAGAAAAGCTCTCGATTCTGCTGGCTTCAGTAACTTTTCCAACGGACTTCTCAGACCCAATGCACTGGGATGGGGAGGCTTCCATCTGGGATTCTCGAACACTGATCCTGAACCGGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCAAGAGATGCCGTTGTGGACCAGAAGTACTGTGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCGTCTCTGGCGCAACCACTACCAATAATGCCTCAAAGCTCATCCCTAATGCTTCCTCCTCTGCCTCAGTAGTGGTGCCAGGCAATGCTGCGTCCAATACCCTTTCCTTTGCACATCATCATTCCAAGAATTTGCAGCCTCTTCCATCTCATACTTCTGCTCCAACCAACATCGACAGAATGTTCATGAACAACAAGGAGAATGCTAATGAGAGAGTGCAGGACGGTTCTGCTCTTCCAATGCTGCCTCCCACCCTTGATCTGAAGCCCAAGGAAAACCCTTTTATGATACAAAAAGAGCAAATCACATACCAAGAATCGTCAAGGAATGAGTTTGGGCTTGTCACTTCTGACTCCCTACTTAACCCTTCTCATAAAAGCTTTGGTTCTTCACAAAACCCTTCTTACAGAGACACAGAGTCACAGCAATCCCTTCGTCATTTCATGGATGACTGGCCCAAACTTGACATGCAATCAGATAGGACCCAGCTTTCAATATCTATCCCCATGGCCTCCTCAAATTTCATGCCATCCACTTCCTCTCCTACCAATGAAAAAGTCACATTGTCACCTCTTCGACTATCAAGAGAGCTAGATCCAATTCAAATGGGTTTGGGGGTGGGAATTGGTCTGAATGAATCAAGTAATAGGCAGGCAAATTGGATTCCAATTGCTTGGGAAAGTTCCATGGGAGGTCCTCTTGGCGAGGTTCTTCATCTTAGTAACAACACAAGTGATTGCTCCAAGAACTCATCTGCTCTTAACCTCATGACAGATGGGTGGGAAAATAGTTCTTCATTAGGTTCATCTCCTACGGGAGTCTTGCATCAGACCGCGTTTGGATCAGTTTCCAATAGCAACTCAGCGAGCAGTCCGGTGGCTGAGAATAATAAAGGACTCGAAGGGGCCAGCTTGTGCAATGACCTGCTTGGTTCCACTCTCGGCAATTCCTCCTCTTTGCCCAACTTCTATGATGTTGGTTGGTTTATGAAGTGGATGATGAGGTCCAGGTCAAGTGGAGACCCTGATTGCGTGACGCATCAGTGA 1620 0.479 MLLHQRNSLLRSNTSPFSDSQMLTFSSPKSEPQLMDKASPNAALPFPYHQLAAYTRNTGYGSGGMHGVLTTTRGPFTPYQWMELEHQALIYKYITANMAVPSHLLIPIRKALDSAGFSNFSNGLLRPNALGWGGFHLGFSNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAVSGATTTNNASKLIPNASSSASVVVPGNAASNTLSFAHHHSKNLQPLPSHTSAPTNIDRMFMNNKENANERVQDGSALPMLPPTLDLKPKENPFMIQKEQITYQESSRNEFGLVTSDSLLNPSHKSFGSSQNPSYRDTESQQSLRHFMDDWPKLDMQSDRTQLSISIPMASSNFMPSTSSPTNEKVTLSPLRLSRELDPIQMGLGVGIGLNESSNRQANWIPIAWESSMGGPLGEVLHLSNNTSDCSKNSSALNLMTDGWENSSSLGSSPTGVLHQTAFGSVSNSNSASSPVAENNKGLEGASLCNDLLGSTLGNSSSLPNFYDVGWFMKWMMRSRSSGDPDCVTHQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0813 539 ProSiteProfiles QLQ domain profile. 75 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele26g0813 539 SMART QLQ_2 74 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele26g0813 539 MobiDBLite consensus disorder prediction 309 332 - -
Lele26g0813 539 MobiDBLite consensus disorder prediction 191 205 - -
Lele26g0813 539 MobiDBLite consensus disorder prediction 1 34 - -
Lele26g0813 539 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
Lele26g0813 539 Pfam QLQ 75 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele26g0813 539 MobiDBLite consensus disorder prediction 173 205 - -
Lele26g0813 539 MobiDBLite consensus disorder prediction 1 36 - -
Lele26g0813 539 Pfam WRC 144 186 IPR014977 -
Lele26g0813 539 PANTHER GROWTH-REGULATING FACTOR 5 21 365 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0813 Lele-ChrLele26 5201840 5205096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0813 3 510 GRF Transcription Factor Family AT2G22840 44.177 4.84e-99 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele26g0813 WRC 4.9e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0813 26 5201840 5205096 Lele27g1275 27 19532547 19536170 hybridization
Lele26g0813 26 5201840 5205096 Lele28g0800 28 5136480 5139414 hybridization