Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0810 ATGGAAGCAGCCAAGAAGAGAGGACCTGGAAAGTTGGGCCACAAACAGCCTGTGCATAGGAAGTCGATCGACACTTTTGGCCAGAGAACGTCTCAGTTCCGAGGCGTTACAAGGCACAGATGGACTGGTAGATATGAAGCGCATTTATGGGATAACAGTTGTAAGAAGGAAGGGCAGACTAGGAAAGGAAGACAAGTTTATTTGGGGGGCTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTTGCAGCCCTCAAGTACTGGGGGCCCTCAACCCATATTAACTTTCCGTTGGAAAATTACCAGGCTGAACTTGAAGAAATGAAGAACATGAGCAGGCAAGAGTACGTTGCTCACTTGAGAAGAAAAAGCAGTGGTTTTTCCAGAGGAGCTTCAATGTATAGAGGAGTGACGAGGCATCATCAGCATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCAGGAAACAAGGACCTTTATCTTGGAACATTCAGCACTCAGGAGGAAGCAGCTGAAGCATATGACATAGCTGCAATCAAGTTCCGAGTTGCTGTTCTACTTGTTCCAGCTAAGTACAAGAACCAGCTCAATATGTTTCCCCAATAA 609 0.4598 MEAAKKRGPGKLGHKQPVHRKSIDTFGQRTSQFRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRVAVLLVPAKYKNQLNMFPQ 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0810 202 CDD AP2 133 183 IPR001471 GO:0003700|GO:0006355
Lele26g0810 202 Pfam AP2 domain 135 182 IPR001471 GO:0003700|GO:0006355
Lele26g0810 202 Pfam AP2 domain 32 90 IPR001471 GO:0003700|GO:0006355
Lele26g0810 202 SMART rav1_2 134 196 IPR001471 GO:0003700|GO:0006355
Lele26g0810 202 SMART rav1_2 32 104 IPR001471 GO:0003700|GO:0006355
Lele26g0810 202 CDD AP2 31 98 IPR001471 GO:0003700|GO:0006355
Lele26g0810 202 MobiDBLite consensus disorder prediction 1 22 - -
Lele26g0810 202 SUPERFAMILY DNA-binding domain 133 183 IPR016177 GO:0003677
Lele26g0810 202 Coils Coil 99 119 - -
Lele26g0810 202 ProSiteProfiles AP2/ERF domain profile. 134 194 IPR001471 GO:0003700|GO:0006355
Lele26g0810 202 SUPERFAMILY DNA-binding domain 31 100 IPR016177 GO:0003677
Lele26g0810 202 FunFam AP2-like ethylene-responsive transcription factor ANT 31 100 - -
Lele26g0810 202 Gene3D AP2/ERF domain 134 196 IPR036955 GO:0003700|GO:0006355
Lele26g0810 202 Gene3D AP2/ERF domain 31 100 IPR036955 GO:0003700|GO:0006355
Lele26g0810 202 ProSiteProfiles AP2/ERF domain profile. 32 98 IPR001471 GO:0003700|GO:0006355
Lele26g0810 202 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0810 Lele-ChrLele26 5174199 5176681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0810 3 183 AP2-EREBP Transcription Factor Family AT4G37750 86.957 3.83e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele26g0810 AP2 4.4e-14 CL0081