Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0809 ATGGGTTTGGTGAGCTGCATCAGAATCAGCGACTCGGAAGGAGTAGATCATGATGAAGAAGAAAATGAGGCGTTAATGTCGGATATTTGGTATTTTGAGGGGGGCATCCAGCAAGATCACAACCAGGCTACCAGTAGCTCCTGGTCTTTTTCCGCAGCTTCTCTTTCCTCTCCTGTCTGTAAATCAAGACCAAATATACTTGCTGTTTCTTCGTTCGGATTTCCATTGACCAGAGAATCTCTTACTGGGTCGAGAAGGCTCAAGATTGCTCACGTCAATCACACTGGTGTTCGAAGGAATGGAGTAATGGAACTCGTAGTTATTTGGCGGGCAAAGCAGAAAAGCGAATCTGCTTTATTGGTTGTGTGTTCACTTTCCTGTGTGAGGGGGAGCATTTTCCCCTTTTCTGAGCATTATAGTAGTCTTGATCCTAGGGTTCCTGAAGCAAGAGAGGAGTTTAACGGTTTGATCCAGGAGATGGGTGTGCATGAAAATGCCATGGGGTTTCAACATGGACAAGACACAACAATCCTGAATTGCACGTCGTCGGGTGTGAGCGCCAATGTTTCTGAGATCGCAATGAGCTCTGTGTCTATGACCAAGCCTCCTGTTGTGACTAATCATTTTCTTGGGTCTTCTTCAACCTGGGATCCTCTTGTTTCTCTGAATCAGACTCAAACTTTTGGAGGCTCTTCCATGGGTTCTCACAGTGAGTTTGGCAGCTCATCTTACCCTCTTGTGTTGGAAAATCAGGGAATGAGTAGCACATCTCACCTTGTTCAATATATGTCCGATTCTAATTTCGCTGTTCCTTCCTATGCAAGTGGAAGCTTCTCCGAAATGGTTGGCTCTTTTCCACAACAAGGGTGTTCTGATTTAGCTAATACAGGGTATGGCCCAAGTTATAACCAGAACGAGGAGGCAGCAGTGAAAAGGGCTCCATTAAATGGTTCAAAATCTCAGCTTGAGGATCCAACTACTGAAGAAGGAGCCACAGGATCTGCACCTAATGGAAGTAGAAGAAAACGAGGGCTCGATCACAATCCTACGTTCAGTCCAAACAAGAATGCTGAAGGGGAACCAGTGAAGGATTCTTCTGGGAAGAGCTCCGATGGGGCAAAAGAACAAGATGAGAAGAAACAAAAGGTTGAGCAAAACAATACTAGTGCAGATTTGCGGGGTAAGCAATCATCAAAGCAAGCTAAAGACAACTCTCAAAGTGGAGAAGCTCCCAAAGAAAATTTCATCCATGTGAGGGCTCGAAGAGGTCAAGCTACGAACAGTCATAGCCTTGCAGAAAGGTTAAGAAGAGAGAAGATTAGTGAGCGAATGAGGCTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGGAAAGCAGTGATGCTGGATGAGATTATTAACTATGTACAATCGCTGCAGCAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACCGTGAACCCAGAACTGAATTTTGATGTAGAACGGATCCTATCCAAAGATATTCTTCAGTCGCGCATCGCAAATGGGACTATTGGTGGATATGGGTTGAACTCCTCTCACTCGTTCCCTGCTAGAAGTTTTCAGGGAACTCTTCCAGGATCAGGCATACCCAACACATCCCCACCATTCCCTCCTTTGCCTCAGAGTGTTTTGGAGCATGAGTTCCAAAACTTGTACGGAATGGGATACGATTCGAGTACAGCTCTTGACAATGCAGGACCCAGTGGTAATACTCGGAAACCTTTTGCTTAA 1761 0.452 MGLVSCIRISDSEGVDHDEEENEALMSDIWYFEGGIQQDHNQATSSSWSFSAASLSSPVCKSRPNILAVSSFGFPLTRESLTGSRRLKIAHVNHTGVRRNGVMELVVIWRAKQKSESALLVVCSLSCVRGSIFPFSEHYSSLDPRVPEAREEFNGLIQEMGVHENAMGFQHGQDTTILNCTSSGVSANVSEIAMSSVSMTKPPVVTNHFLGSSSTWDPLVSLNQTQTFGGSSMGSHSEFGSSSYPLVLENQGMSSTSHLVQYMSDSNFAVPSYASGSFSEMVGSFPQQGCSDLANTGYGPSYNQNEEAAVKRAPLNGSKSQLEDPTTEEGATGSAPNGSRRKRGLDHNPTFSPNKNAEGEPVKDSSGKSSDGAKEQDEKKQKVEQNNTSADLRGKQSSKQAKDNSQSGEAPKENFIHVRARRGQATNSHSLAERLRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDILQSRIANGTIGGYGLNSSHSFPARSFQGTLPGSGIPNTSPPFPPLPQSVLEHEFQNLYGMGYDSSTALDNAGPSGNTRKPFA 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0809 586 MobiDBLite consensus disorder prediction 310 414 - -
Lele26g0809 586 CDD bHLH_AtBPE_like 414 499 - -
Lele26g0809 586 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 422 492 IPR036638 GO:0046983
Lele26g0809 586 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 303 522 IPR024097 GO:0006355
Lele26g0809 586 Gene3D - 421 495 IPR036638 GO:0046983
Lele26g0809 586 MobiDBLite consensus disorder prediction 361 386 - -
Lele26g0809 586 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 424 474 IPR011598 GO:0046983
Lele26g0809 586 SMART finulus 430 480 IPR011598 GO:0046983
Lele26g0809 586 FunFam Basic helix-loop-helix transcription factor 421 493 - -
Lele26g0809 586 Pfam Helix-loop-helix DNA-binding domain 427 475 IPR011598 GO:0046983
Lele26g0809 586 MobiDBLite consensus disorder prediction 387 411 - -
Lele26g0809 586 MobiDBLite consensus disorder prediction 319 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0809 Lele-ChrLele26 5160048 5167731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0809 167 582 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 40.855 5.37e-78 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele26g0809 HLH 4.7e-06 No_clan