Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0807 ATGCAGCCCCGTCCATACATTTCCTCTAATCTGTTCAGCTGCGTAACCGAAACTTCGAAAAGTTACAAAGCGCCCAGCGAGGCATCTTGCAAGTGCCAAGGTCTTCGTCTCCGCCGTCCCTGTCCTCCTCCTTCGTCGTCTCCGGGAGGTGTCTCGGATCCACATTCGGACATGGCAGATCAGTACACTCTTGGTTGGATCTTTTTCTCCGGTTTTCTCGCCTTGGTTGCCCTCTACAATTTGGTTTTTGACAGGAAGAGCCTCATTGTTTCCTCCGCGGCTTCACCTCAGTGCATGAATAGCATAACCACAGCTGCCGGAGAATGCGGATCCATTGACAGCTGCGATAAGGTCGACGTCATTATCGTCGGAGCTGGTGTTGCTGGCTCTGCTCTGGCGCACACTCTTGGCAAGGATGGACGCCGAGTACATGTTATAGAAAGAGATTTGAGGGAGCCTGACCGAATTGTTGGGGAGTTGCTACAACCTGGGGGCTATCTCAAACTAATTGAGCTCGGGCTCGAAGATTGTGTGCAGGAAATTGATGCTCAGCAAGTGTTTGGTTATGCTCTTTACAAGGATGGAAGAAATACTCGACTCCCTTATCCATTGGAGAAGTTTCACTCAGATGTTTCTGGTAGAAGCTTTCACAATGGACGTTTTATTCAGAGGATGAGGGAGAAGGCTGACTCCCTTGCCAATGTACTATTAACGGAAGGAACAGTTACTTCCCTACTTGAAGAGAATGGGACAATTAAAGGTGTGCATTATAAGACTAAAGATGGCCAAGAATTTTCAGCATATGCTCATCTCACCATTGTTTGTGATGGGTGTTTTTCAAACTTGCGCCGTTCTCTCTGTAATCCTAAGGTAGACGTTCCCTCTTGTTTTGTTGGTTTGATATTGGAGAACTGTGAACTTCCATATGCAAACCATGGCCATGTTATACTAGCAGATCCTTCACCAATTTTGTTCTATCCTATAAGTAGTACGGAGATTCGCTGTCTGGTTGATGTACCTGGTCAGAAGGTTCCTTCAGTTTCAAATGGTGAAATGACCAAGTATTTGAAGACAGTGGTAGCTCCACAGGTCCCCTCTGAGCTTTATGATGCCTTCATAGCTGCGGTGGACAAAGGTAGCGTGAGGACAATGCCAAACAGAAGCATGCCGGCAGCCCCTTATCCTACTCCCGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGCCATCCTCTTACTGGGGGTGGAATGACTGTGGCACTGTCTGACATAGTGGTGCTGCGGAATCTTCTCAAGCCTTTGCGTGACCTAAATGATGCATCCACGCTTTGCAAGTATCTCGAGTCCTTCTATACCCTGCGGAAGCCAGTGGCATCCACCATAAATACGTTGGCGGGAGCCCTATACAAGGTTTTTAGCGCATCTCCTGATAAGGCGAGGAGTGAAATGCGCCAGGCATGCTTTGATTATCTAAGTCTCGGAGGTGTATTCTCGGAAGGGCCAATTTCTTTGCTTTCTGGATTGAACCCCCGCCCCTTAAGCTTGGTTCTCCATTTCTTTGCTGTTGCAACTTACGGTGTTGGCCGTTTGTTGATTCCATTTCCGTCGCCCAATCGAGTTTGGATCGGAGCACGATTGATATCCGGTGCTTCAGGAATAATCTTCCCCATAATTAAGGCAGAAGGAGTTCGCCAGATGTTCTTCCCTGCGACCGTCCCAGCTTATTACAGGACACCTCCGTCTAAACAGGAGTGA 1755 0.4821 MQPRPYISSNLFSCVTETSKSYKAPSEASCKCQGLRLRRPCPPPSSSPGGVSDPHSDMADQYTLGWIFFSGFLALVALYNLVFDRKSLIVSSAASPQCMNSITTAAGECGSIDSCDKVDVIIVGAGVAGSALAHTLGKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLEDCVQEIDAQQVFGYALYKDGRNTRLPYPLEKFHSDVSGRSFHNGRFIQRMREKADSLANVLLTEGTVTSLLEENGTIKGVHYKTKDGQEFSAYAHLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLILENCELPYANHGHVILADPSPILFYPISSTEIRCLVDVPGQKVPSVSNGEMTKYLKTVVAPQVPSELYDAFIAAVDKGSVRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDASTLCKYLESFYTLRKPVASTINTLAGALYKVFSASPDKARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVATYGVGRLLIPFPSPNRVWIGARLISGASGIIFPIIKAEGVRQMFFPATVPAYYRTPPSKQE 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0807 584 SUPERFAMILY FAD/NAD(P)-binding domain 117 492 IPR036188 -
Lele26g0807 584 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 396 411 - -
Lele26g0807 584 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 119 141 - -
Lele26g0807 584 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 268 283 - -
Lele26g0807 584 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 411 427 - -
Lele26g0807 584 PANTHER SQUALENE MONOOXYGENASE 90 580 IPR040125 GO:0004506|GO:0016126
Lele26g0807 584 FunFam Squalene monooxygenase 2 112 492 - -
Lele26g0807 584 Gene3D - 111 498 IPR036188 -
Lele26g0807 584 Pfam NAD(P)-binding Rossmann-like domain 122 148 - -
Lele26g0807 584 Pfam Squalene epoxidase 269 541 IPR013698 GO:0004506|GO:0016020|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0807 Lele-ChrLele26 5136283 5140092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0807 66 584 Miscellaneous Gene Families AT1G58440 75.240 0.0 811
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0799 01 4634526 4635833 Lele26g0807 26 5136283 5140092 CCT
Lele02g0771 02 4706746 4708059 Lele26g0807 26 5136283 5140092 CCT
Lele03g0792 03 4631975 4634497 Lele26g0807 26 5136283 5140092 CCT
Lele04g0789 04 4837115 4838428 Lele26g0807 26 5136283 5140092 CCT
Lele26g0807 26 5136283 5140092 Lele27g1281 27 19590751 19595243 hybridization
Lele26g0807 26 5136283 5140092 Lele28g0794 28 5071075 5075986 hybridization