Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0803 ATGGGGAGGGCTCCTTGCTGCGATAAAGCGAACGTGAAGAAAGGACCTTGGTCCACAGAAGAAGATGCAAAACTCAAGTCCTACATCGAACAGCATGGAACCGGTGGAAACTGGATCGCTTTGCCTCAGAAGATCGGGCTAAAGAGATGTGGGAAGAGCTGTCGACTGAGGTGGCTAAACTATCTTCGACCGAATATCAAGCATGGGGGTTTCTCTGAAGAAGAAGACAACATTATTTGCAGCCTCTACGTTAGTATTGGGAGCAGGTGGTCGGTGATAGCGGCACAATTGCCAGGAAGAACAGACAACGACATAAAGAACTACTGGAACACAAAACTGAAGAAGAAGCTTCTGGGTAATAATAAGCACCGTAAAGATCAACAATCACGTAGTAAGAGCAAGCACGAAGGGGCTAATAGAATCATCACCTCTACCAATTCCTTATTAGTTCCTGAAAATTCTTCTATAAATACTATTTTTCCACAACCATATTGGCCACTCATGCCCGTGATATCTCCCTTGCAATATTCAAATCAAGAGCCATGTTTCAACGATCAAGATTCCATCAAAAAGTTGCTCATGAAACTGGGAGGAAGATTTTCCGATGTGGATAATCACAATTATTATCATCCTACCCTCGATGCTTTGAATATTAATCCCAATCTATTCCCAGATCATGGTACTCCCTGCACACAACCAGCAGTTTGTGAAGAACAACAAGGAAATATGGCTTCTTCTTCCTCTTGCATGATAAGCAGCAATCAGATAGACTTGGGGCTAGAGACAGGAGGACTTGAGGAGATAGTATGCAGTAATAGTACTTATACTTATCCACAAAGATTAGATGGACTCGAACTGCTGTTTGGGGACGACGACGTGATGATCAATGACAAGATAGCCCCACCTTCAGATACCAACTCTCTCATTTATCAATCTTTTGTTTCTTCCAATTACCAGGACATGCCACAACAATGTGCTTTCCCAGAGTTAAGGTTTAACCGGCCATAA 1008 0.4286 MGRAPCCDKANVKKGPWSTEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTKLKKKLLGNNKHRKDQQSRSKSKHEGANRIITSTNSLLVPENSSINTIFPQPYWPLMPVISPLQYSNQEPCFNDQDSIKKLLMKLGGRFSDVDNHNYYHPTLDALNINPNLFPDHGTPCTQPAVCEEQQGNMASSSSCMISSNQIDLGLETGGLEEIVCSNSTYTYPQRLDGLELLFGDDDVMINDKIAPPSDTNSLIYQSFVSSNYQDMPQQCAFPELRFNRP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0803 335 CDD SANT 71 113 IPR001005 -
Lele26g0803 335 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele26g0803 335 CDD SANT 16 62 IPR001005 -
Lele26g0803 335 MobiDBLite consensus disorder prediction 122 137 - -
Lele26g0803 335 SMART sant 13 64 IPR001005 -
Lele26g0803 335 SMART sant 67 115 IPR001005 -
Lele26g0803 335 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele26g0803 335 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele26g0803 335 PANTHER OS09G0431300 PROTEIN 1 246 - -
Lele26g0803 335 MobiDBLite consensus disorder prediction 119 138 - -
Lele26g0803 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele26g0803 335 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele26g0803 335 FunFam Transcription factor MYB36 70 139 - -
Lele26g0803 335 FunFam Transcription factor RAX3 7 68 - -
Lele26g0803 335 Gene3D - 7 68 - -
Lele26g0803 335 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele26g0803 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lele26g0803 335 Gene3D - 70 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0803 Lele-ChrLele26 5107312 5108612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0803 1 195 MYB Transcription Factor Family AT3G49690 63.547 3.79e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g0803 Myb_DNA-binding 7.7e-14 CL0123