Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0796 ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAGTGTTAAGAGAGGCCCTTGGTCTCCCGAAGAAGACGCCACTCTCAGGACTTATGTTCAAACTCATGGCACTGGTGGTAATTGGATCGCATTGCCCCTTAAAGCAGGACTTCGGAGGTGTGGCAAGAGTTGCCGTCTACGGTGGCTCAATTATCTCAGGCCAGACATCAAACATGGAGGCTTTACTGAAGAAGAAGACAACATCATTTGCACCCTTTACGGGCAAATGGGAAGCAGATGGTCTGCCATAGCCTCTCAGCTTCCCGGTAGAACAGACAATGATGTGAAGAACTACTGGAACACCAAGTTAAAGAAGAAGCTAATGGCAGGAGAAGTCATGAACCTCAAAACTACTCGTCCTTCGGCCCCATTAATAACTCATCATAATGTTCAAATCCAAAACCAGAATTCAGATTTTGCTGCTTCGCAAATAAGCCACACTAATTCATCTTCCTCAACTCTGCCTACTGTGACCGACGCTAATTCTGGGTTTCACATGATCAGTTTTGAGCCAACTCAATCACACAGTGCAGCAGGGTTGATAGATGTCTCAGAAATCAACGCAAGATCAAGTTTAATGTCCTTGTCTCAAGAAGGTTCAAGTATTTCTGCAGATTCATCTTTGATTGCAACGCAGAACAAATGCTTGTCTCTGCCGGATCGTGCTGGTTACGAAGCAACCCAGGTGTTAATGAACTTTGGGTTTGGATTTCCCCCTGACCTAGTCAACAATGGCTTTTACAACCAAGAGAAAATCGGTGAATTCGCTTCAAGTTTCTATTCTCATGAGTTGCTTGATTTTGGGTACGCTGACATGAAGCCACAAGCACGGAATTGA 867 0.451 MGRAPCCDKASVKRGPWSPEEDATLRTYVQTHGTGGNWIALPLKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDNIICTLYGQMGSRWSAIASQLPGRTDNDVKNYWNTKLKKKLMAGEVMNLKTTRPSAPLITHHNVQIQNQNSDFAASQISHTNSSSSTLPTVTDANSGFHMISFEPTQSHSAAGLIDVSEINARSSLMSLSQEGSSISADSSLIATQNKCLSLPDRAGYEATQVLMNFGFGFPPDLVNNGFYNQEKIGEFASSFYSHELLDFGYADMKPQARN 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0796 288 FunFam Transcription factor RAX3 7 68 - -
Lele26g0796 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele26g0796 288 CDD SANT 71 113 IPR001005 -
Lele26g0796 288 Gene3D - 70 146 - -
Lele26g0796 288 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele26g0796 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lele26g0796 288 CDD SANT 16 62 IPR001005 -
Lele26g0796 288 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele26g0796 288 Gene3D - 7 68 - -
Lele26g0796 288 PANTHER OS09G0431300 PROTEIN 1 216 - -
Lele26g0796 288 SMART sant 67 115 IPR001005 -
Lele26g0796 288 SMART sant 13 64 IPR001005 -
Lele26g0796 288 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele26g0796 288 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele26g0796 288 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0796 Lele-ChrLele26 5052786 5054226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0796 1 135 MYB Transcription Factor Family AT5G65790 71.852 5.05e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g0796 Myb_DNA-binding 8.6e-13 CL0123