Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0782 ATGTTTCAGAGAGCCCCTGCCACAAACAGAGGTTTCATCAGAGAGAATCCAGATGTTTTGATTGCGATGATTGCAGAGAAGCAGATAATAGGAGGTTCTCGCTGGAAATATTTGCAAGACTTCGGTTTGGCTAGATTAGTGGAAGTCTTGGATGAAATTCCACTCAGTGATGGCTATTTATTTGACCAAACCCGAATCATGAATGGAATTTCAATGCTTGCTGCTGGAATGCAAGATGAACTCATAAGTAATGTCCATTCAGATGTTCCTCTTATGAATCCTGTCTGCATTGCTGATCCTAATTCCTTGGTTCCATCTCAAGGAAAGAATTTTTTAGCCCCATGTTCCCAAAACAACAGTGTTATTCAAGATCAACAAGCTGGAGCCACAATCACTCCTGCTTCACTTGCAGCAAGATTTGGTCTTCAAGAAAACTTTGATAAATCAGCAGCTTTGTCTCCTTCACTCTGTTCATTGGAGGCACTGGTACCATATATGTTAAGCAATTGGCAGGATCATTCAAACACTTCGCTTCCAACTTCTGGAGATCGTGTGTATGGTGAAGTACCTCGTACTACTAGGTTCCAGACTTATTCGTCCACAGCAAACCTGGATCCAAATGGATGGACATCTTCAAATGTTGCAGCAAACTTAACCCATCATGGTTATGAATATGATTGCCAGAATTTCAGGAATGAGCTCTCATTAAGTCTAGCAACATCTCCCCCCACAGGTCAGTGCTCAGAGGTGAGTTCTGATAGCTTGGAACAAGCTTCCTGTAGCAGTAGACATGTGAATTTTTCACAAGTAATATTGGGGTCCAGATATCTTACTGGGATTCAAGAAATACTTGCTCAAATTGCAAGGTATTCACTCGAAAATACAGAACAGATAAATAATTGTTCAGCTGCTTGTAGTAGTAGAGCCAGAGCCAGAGCCAGAGCAGAAGGGAATATATCATCAACCTCAGATCTTCCATCCAGGAGAATGATAGAGACAACGAATAACAATGCAGATTCTATGTTTGTAGCTCAAGTGAATTCTTCATTTGCAACACACGATGCTGCTGAATCAAAGAAATCCCAGCTTCTGACACTTCTACAACTGGTGGACAGTCGATATAATCAGTGTTTGGATGAGATTCATACTGTTGTATCAGCATTTCATGCTGCTACAGAGTTGGACCCGCAAGTTCATGCACAATTTGCCCTTCAGACAATCTCAATGTTGTACAAGGATTTGCGTGAGAGGATAAGCAATTATATCCTTTCCATGGGAGAAATGTTGAACAACTCAGGCTCAGAAGAAGAGAAGGAAAGGTCAACGGAAGCTTTATTCATCGAAAAGCACTGGGCTCTGCAGCAATTGAAAAGAAAGGAGCATCAGTTATGGAGGCCCCAAAGGGGCTTGCCAGAACGATCTGTCTCCGTTCTAAGGGCTTGGATGTTTCAGAATTTCCTCCATCCGTATCCAAAAGATGCAGAGAAGCAATTACTTTCAGTAAAAAGTGGTTTGACTAGAAGCCAGGTATCGAACTGGTTCATTAATGCTCGTGTAAGGCTGTGGAAACCTTTGATTGAGGAAATGTACGCAGAAATGAACAGAAGAAAGGCTCTTAGAAATGAAGGAGGCACGCAGAGCAGCAGGGTACGCTTGAGCAGTCAAAGATTTAGTTTGAATTGA 1683 0.4195 MFQRAPATNRGFIRENPDVLIAMIAEKQIIGGSRWKYLQDFGLARLVEVLDEIPLSDGYLFDQTRIMNGISMLAAGMQDELISNVHSDVPLMNPVCIADPNSLVPSQGKNFLAPCSQNNSVIQDQQAGATITPASLAARFGLQENFDKSAALSPSLCSLEALVPYMLSNWQDHSNTSLPTSGDRVYGEVPRTTRFQTYSSTANLDPNGWTSSNVAANLTHHGYEYDCQNFRNELSLSLATSPPTGQCSEVSSDSLEQASCSSRHVNFSQVILGSRYLTGIQEILAQIARYSLENTEQINNCSAACSSRARARARAEGNISSTSDLPSRRMIETTNNNADSMFVAQVNSSFATHDAAESKKSQLLTLLQLVDSRYNQCLDEIHTVVSAFHAATELDPQVHAQFALQTISMLYKDLRERISNYILSMGEMLNNSGSEEEKERSTEALFIEKHWALQQLKRKEHQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKQLLSVKSGLTRSQVSNWFINARVRLWKPLIEEMYAEMNRRKALRNEGGTQSSRVRLSSQRFSLN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0782 560 CDD homeodomain 464 524 IPR001356 GO:0003677
Lele26g0782 560 Pfam Homeobox KN domain 481 520 IPR008422 GO:0003677|GO:0006355
Lele26g0782 560 MobiDBLite consensus disorder prediction 539 560 - -
Lele26g0782 560 SMART HOX_1 464 528 IPR001356 GO:0003677
Lele26g0782 560 Pfam Associated with HOX 270 419 IPR006563 -
Lele26g0782 560 ProSiteProfiles 'Homeobox' domain profile. 461 524 IPR001356 GO:0003677
Lele26g0782 560 Gene3D - 467 545 - -
Lele26g0782 560 SMART prehox3 265 420 IPR006563 -
Lele26g0782 560 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 204 544 - -
Lele26g0782 560 SUPERFAMILY Homeodomain-like 466 533 IPR009057 -
Lele26g0782 560 MobiDBLite consensus disorder prediction 540 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0782 Lele-ChrLele26 4986718 4989422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0782 232 537 Homeobox Transcription Factor Family AT4G32980 55.975 2.40e-108 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele26g0782 POX 7.4e-28 No_clan