Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0778 ATGTCCAAAATGAAGCATCTACTGCGAAAGCTTCATATAGGTGGTGGGTTCAATGAACCCCACAGGTTGCCTGATACCCGCCCGGTGATCATTCCCAGTCCCGTCCCTAACCTCGCATCATCTTCGTCGACGTTGGCATCGAATACAGTGGGCACAGTCCGGCCAAATGAATCGGTTGCTGATCGGATGGATATTGATGGCGCTGGTGCTATATTTGGCGACAAGGGAGCCGATTTTAGTTTATTGGAGGAGGAGTTTCAATTGCAGTTGGCTTTAGCTATTAGCGCTTCCGATCCTGATGTCCGCAAGGACCCTGAGTCTGCCCAGATCGACGCCGCGAAGCAGATGAGCCTCGGGTCTGCGGCTTCCGTCACCGACACGGAAGCCATCGTCCAGTTTCAATCGCTTCGTTATTGGAACTATAATGTCATTGATTATGAGGAGAAAGTGAGGGATGGATTTTATGATTTATATGGATTCTCCTCCAATTTGACCGAACGAGGAAAGATGCCGTTGTTGGTGGATCTGCAAACTGCTTCCCTCTCTGAAAATGTTGGTTGCGAAGTGATTTTGGTGAATCGTATGGTTGATATTAAGCTGAAACAGCTTGAGAAAAAAGCCTTTGCTGTATCCAAGGACTGCTGCTTATCTGAACAAGGGCTAGTTTCAAGTGGCTTGCTTCAGAAACTTGCTGATATTGTTGTTAATAGAATGGGTGGACCAGTTGGTGACCCTGATGAGATGTTGAAAAAGTGGTCAGCAAGGAGTCATGAGTTACGTGATTCTTTGAGGGCAATTGTTATTCCCCTTGGCTGTCTTGATGTTGGACTTTCTCGCCATCGAGCCCTACTTTTTAAGGTGATGGCTGATAGGATTAATGTTCCCTGCATGCTGGTCAAAGGGAGCTATTACACTGGAACTGATGATGGAGCTGTGAATTTGATTAGAGCTGATGATGGAAGTGAATACATTATTGATTTGATGGGTGCACCTGGTGCTCTTATTCCTACCGAAGCACCCAGTAGTCATTTCCAAAACTACAGTTTTCTTGGAACAGAGAGTGGTCCTGTCAATCTGCTAAAGATGCATGAAGAACAAGTTCTTGATTCTTCATTGACCAAGGCAGTTGTTTCTTGCAAGAGGAAAATTGAGGTTGACTCGGTCTATGATGATGCAAATGGTATTGATAATAAAGTTGGAGTGGCTTTTAATTGCAATCAATTTGGGAACGATTCTGCTATTCAACTTAAATCAGATAATAGAGATAGAAACCTAAATGATGGTAAAAGTGAGAAAGTTAAGTCAGTACTGGGTGAGGGTGCAGAATGGGAAATTCAATGGGAGGATCTTCATTTCGGTGAGCGTATTGGTATAGGTTCTTATGGTGAGGTTTACCATGCTGACTGGAAAGGCACTGAAGTTGGTGTGAAGAAGTTTCTGAACCCAGACTTTTCTGGAAATGCGTTGGCTCAGTTCAGATCCGAAGTTGAGATCATGTTGAGGCTGCGGCATCCAAATGTTGTACTTTTCATGGGTGCTATTACTCGGCCACCACATTTTTCTATATTGACAGAGTTCCTTCCAGGAGGGAGTTTATATAGGCTATTGCATCGACCCAATTTTGAACTTGATGAGAAGAGGAGGTTGCAAATGGCTCTTGATGTGGCTAAGGGTATGAATTACTTGCACACAAGCCATCCTCCCATTGTTCATCGGGATTTGAAATCTCCAAATCTTCTTGTTGACCAACATTGGGTTGTTAAGGTTTGTGATTTTGGTTTGTCACGTATGAAGCACAATACCTTTCTGTCCTCAAAATCTTCTGCGGGAACGCCCGAGTGGATGGCACCTGAAGTATTAAGAAATGAACCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATTTTGTGGGAATTGGCTACTGCAAGGATCCCATGGAAAGGGTTGAACTCAATGCAGGTTGTTGGCGCTGTTGGATTCCAAAATAGACGGCTAGAAATTCCTGAAGATGTTGATCCGATGGTAGCACAAGTAATACGCGACTGTTGGCAAATGGAGCCAAACTTGCGGCCATCATTCTCACAGCTTATGTCTCGTCTCCGCCATCTTCAACATCTTGTTGTGAAAGATAGGAGCTCAACGCAATAA 2154 0.4424 MSKMKHLLRKLHIGGGFNEPHRLPDTRPVIIPSPVPNLASSSSTLASNTVGTVRPNESVADRMDIDGAGAIFGDKGADFSLLEEEFQLQLALAISASDPDVRKDPESAQIDAAKQMSLGSAASVTDTEAIVQFQSLRYWNYNVIDYEEKVRDGFYDLYGFSSNLTERGKMPLLVDLQTASLSENVGCEVILVNRMVDIKLKQLEKKAFAVSKDCCLSEQGLVSSGLLQKLADIVVNRMGGPVGDPDEMLKKWSARSHELRDSLRAIVIPLGCLDVGLSRHRALLFKVMADRINVPCMLVKGSYYTGTDDGAVNLIRADDGSEYIIDLMGAPGALIPTEAPSSHFQNYSFLGTESGPVNLLKMHEEQVLDSSLTKAVVSCKRKIEVDSVYDDANGIDNKVGVAFNCNQFGNDSAIQLKSDNRDRNLNDGKSEKVKSVLGEGAEWEIQWEDLHFGERIGIGSYGEVYHADWKGTEVGVKKFLNPDFSGNALAQFRSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPGGSLYRLLHRPNFELDEKRRLQMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDQHWVVKVCDFGLSRMKHNTFLSSKSSAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATARIPWKGLNSMQVVGAVGFQNRRLEIPEDVDPMVAQVIRDCWQMEPNLRPSFSQLMSRLRHLQHLVVKDRSSTQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0778 717 CDD STKc_MAP3K-like 456 702 - -
Lele26g0778 717 SMART serkin_6 450 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0778 717 ProSiteProfiles Protein kinase domain profile. 450 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0778 717 Gene3D Phosphorylase Kinase; domain 1 443 527 - -
Lele26g0778 717 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 139 707 - -
Lele26g0778 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
Lele26g0778 717 FunFam Serine/threonine-protein kinase CTR1 529 712 - -
Lele26g0778 717 PRINTS Tyrosine kinase catalytic domain signature 524 537 IPR001245 GO:0004672|GO:0006468
Lele26g0778 717 PRINTS Tyrosine kinase catalytic domain signature 563 581 IPR001245 GO:0004672|GO:0006468
Lele26g0778 717 PRINTS Tyrosine kinase catalytic domain signature 673 695 IPR001245 GO:0004672|GO:0006468
Lele26g0778 717 PRINTS Tyrosine kinase catalytic domain signature 629 651 IPR001245 GO:0004672|GO:0006468
Lele26g0778 717 PRINTS Tyrosine kinase catalytic domain signature 610 620 IPR001245 GO:0004672|GO:0006468
Lele26g0778 717 Pfam Ethylene-responsive protein kinase Le-CTR1 132 335 - -
Lele26g0778 717 FunFam Serine/threonine-protein kinase isoform 1 441 528 - -
Lele26g0778 717 Pfam Protein tyrosine and serine/threonine kinase 450 702 IPR001245 GO:0004672|GO:0006468
Lele26g0778 717 SUPERFAMILY Protein kinase-like (PK-like) 440 701 IPR011009 -
Lele26g0778 717 Gene3D Transferase(Phosphotransferase) domain 1 529 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0778 Lele-ChrLele26 4944455 4950940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0778 365 716 MAP Kinase Kinase Kinase AT5G11850 67.898 1.06e-170 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele26g0778 PK_Tyr_Ser-Thr 8e-65 CL0016