Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0775 ATGTTCTTGATTGAGGATCTCTGGTCGTTGCTCCAGCTTGAGCGTCTTTCATCAAAATCTCCCTCTTCAGGATCGCTGTTCCAGTATTTACGTGAAACCATGACCAACTCGAGCTGCGGAGGGGCCGACGTTGAGCTCTGCCGAGACGACTCTGCCGCATTCGTCCTCAAGTTCGTGGCGATCGCTTCCATACTCCTCGCGGGGATGACCGGAGTCGCCTTACCTCTTTTTGGGAAACATCGGTATAACCTCCGCACAGACGGCAGCCTCTTCGTTACGTCGAAGGCATTCGCGGCGGGAGTGATTCTGGCCACCGGCTTTGTCCACATGTTATCGGATTCATCGGAGGCCCTGACAAATCCCTGTTTGCCCAAGTCATGGTCAAAGTTCCCCTTCACCGGTTTCTTCGCCATGATCTCAGCCCTCTTAACACTCTTGGTCGATTTCGTGGGAACCCAATATTATGAACGGAAACAGGGGATTGCGCGGGCCACCGAAATCCAAGGACGGATCGGGACGTCAGAGCCGGGCATGGAATCGGGAATTGTGCCCGTTCTTGAGGTTAGGGACATGAGTGGGAAAGTGTTTGGCGAAGAAGAAGGCGGTGGAATGCACATAGTGGGGATGCATGCACACGCCGCACACCATAGGCACAACCACCCACAAGGCCACGACGCCTGTCATGGTGGTGTTAAGAAACAGTCCCATGTCGGCCATAGCCATTCCCATGGATTCGGAGACGATGAGGATGAAGACGGTGTACGCCATGTCGTCGTTTCACAGGTGTTGGAACTCGGGATTGTATCACATTCAGTTATAATCGGGCTATCTTTGGGTGTGTCGCACAGCCCTTGTACCATAAGGCCGCTGATAGCAGCCCTATCATTTCATCAGTTCTTTGAAGGATTCGCACTCGGAGGTTGCATCTCGCAAGCTCAATTCAAGACCTCATCAGCAACCATGATGGCCTGCTTCTTCGCCCTAACGACGCCCTTTGGCATCGGAATAGGCACGGCGATCTCTTCCGGCTATAATCCATATAGTTCAGGAGCACTGGTAACGGAAGGCATATTGGACGCTCTGTCGGCTGGGATTTTAGTGTATATGGCTTTGGTAGACCTAATAGCTGCTGATTTTCTGAGCAAGAGGATGAGCTGTAACTTCAGGCTCCAGATGGTTTCATATTGTATGCTTTTTCTTGGGGCTGGACTGATGACTTCGCTTGCGATCTGGGCCTGA 1239 0.523 MFLIEDLWSLLQLERLSSKSPSSGSLFQYLRETMTNSSCGGADVELCRDDSAAFVLKFVAIASILLAGMTGVALPLFGKHRYNLRTDGSLFVTSKAFAAGVILATGFVHMLSDSSEALTNPCLPKSWSKFPFTGFFAMISALLTLLVDFVGTQYYERKQGIARATEIQGRIGTSEPGMESGIVPVLEVRDMSGKVFGEEEGGGMHIVGMHAHAAHHRHNHPQGHDACHGGVKKQSHVGHSHSHGFGDDEDEDGVRHVVVSQVLELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKTSSATMMACFFALTTPFGIGIGTAISSGYNPYSSGALVTEGILDALSAGILVYMALVDLIAADFLSKRMSCNFRLQMVSYCMLFLGAGLMTSLAIWA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0775 412 PANTHER ZINC/IRON TRANSPORTER 55 405 - -
Lele26g0775 412 TIGRFAM zip: ZIP zinc/iron transport family 39 412 IPR004698 GO:0005385|GO:0016020|GO:0071577
Lele26g0775 412 MobiDBLite consensus disorder prediction 217 250 - -
Lele26g0775 412 Pfam ZIP Zinc transporter 55 409 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0775 Lele-ChrLele26 4920670 4922816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0775 25 412 Inorganic Solute Cotransporters AT1G60960 67.581 1.32e-174 492
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0775 26 4920670 4922816 Lele27g1309 27 19820297 19822830 hybridization
Lele26g0775 26 4920670 4922816 Lele28g0762 28 4844168 4846318 hybridization