Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0765 ATGGATTCATCACAAGAGTCCTCGCTATCTGCAAATGTTGCTGGTTTAGTGGATAATGCATCACTTAAGAGGAAGAATTCCAAGCTCGATGGCGTGCCTGTGTATGTCAAGGAGTTAATTGCCGGTGGGGTTGCCGGTACACTTTCTAGGACTGCTGTTGCGCCCCTGGAGCGGGTCAAAATACTCCGGCAGACAAGGACACCAGGATTTCACTCTCTTGGTGTTTATCAATCTTTAAACAAGTTGATGAAGAATGAAGGTTTGCCAGGATTGTACAAAGGAAATGGAGCAAGTGTTATCCGGATTATTCCTTATGCTGCCTTGCATTTTATGACATATGAGCGGTACAAGTGCTGGATCTTGGAGAATTGCCCAACGTTAGGATCAGGTCCTGTTATTGATCTTTTAGCTGGATCCGCAGCTGGAGGCACTTCAACTTTGTGTACATATCCTCTAGACCTTGCCCGTACAAAACTTGCTTATCGGGTGGTAGACACAAGAGGAAGTATCAAAGGTGTCATGGAAGATGTTCATTCTCGAACTGCACATAACGGAATTAAAGGTGTTCTGACACGTGCCTACAAGGAAAGGGGAGTTCGTGGACTTTATAGAGGTGTAGCTCTTGCTGGCTTGTTTGGACAGACCTTAACGTACCCTATAGATGTTGTTAAGAGACAGATGCAGGTTGGCAGCCTGCAGAATTCAGCTCATGGTGATGTCAGATACAGGAATGCGTTTGCGGAACTTAGGATTATTGTTGCTAATCAAGGGGGGAGGCAGTTGTTCGCAGGCATGAGCATAAACTACATTAGGGTTGCTATGATGCCAGATTGTTCCATCAGCGGCGATTGGTTTCACTACATACGACATGATGAAGGCTTGGCTTGGCGTAGCACCCCAGCAGAAGATTGCTTGGTGGCCTTTGCTGAAATTGTTCTCATGGAGTATGCCAGCCGCGGCAGGCTAGCAGGGATGGGTGCTTCTGGAAAATGGGTGAGATCATTAATCGGGCTCAGGAAGTCTGATAAGGATGACCATGCCAAGGAGGGTGATGGCAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGACATGGCTTCCTGGAAAGGTTTCAGAGGAAACCACAGAGCTGCCTCGGAGGGTTCTGATTCTCCAGTCGCTAATGCTTTCACAGCTGCAATGGCCACCGTCATTCGAGCTCCCCCTAAGGATTTCAGACTTGTTAGGCAAGAATGGGCAGCAATCAGAATTCAAACTGCATTTCGCGGTTTCTTGGCAAGAAGGGCTTTAAGAGCATTGAAAGGAGTGGTAAGGCTTCAAGCTCTTGTGAGAGGTCGACAAGTGAGGAAGCAAGCTGCAGTGACATTGAGGTGCATGCAGGCTCTAGTTCGTGTTCAAGCCCGAGTGAGGGCTCGTCGTGTTCGAATGTCCATAGAGGGCCAGGCCGTGCAAATGATTCTTAATGAACGTCGCACCAAGGCTGATCTCTTGAAGCAAGCTGAGGAGGGATGGTGTGATAGCAAAGGAACTCTGGAAGACGTCAAAGCTAAGCTTCAGATGAGACAGGAAGGAGCCTTCAAGAGAGAGCGAGTCATTGCATATTCTCTTTCTCAGAAGCAGTGGAGATCAACCCCTTGTTCAAATGCACGAACAAACACGTCTCTCAAGAACTTTGAGATCGACAATTCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCCAAGCCCTGGGAAACTAGATTGATGGAACAATCACAGACCGAGGCCTCTGAAAAAATTAAAACCCCACCTCCTAAGAAGTTTGTTGATTCCTTGGCAAACTCAAATTCAAAACCTTTGGAACAAGGCTTAGTCAAAGTCAGAAAGAACAATGTCAGCACAAGGATCTCAGCTAGGCCTCCCATTGCTGGGCAAACAACACGTTCATCCTCTAGTCCAAGTTCTGAATTTCGATATGATGAGAGCTCTGCTTCATCCTCCATTTGCACTTCCACAACACCAATATCTGGGAACACTGTGTTGGCCTCTGAAAGGACAGAGGATAGCAACGCGAGTAGGCCGAGCTACATGAACCTCACCGAGTCAACCAAGGCAAAACAAAAGGCAAGCAATGTCGTTGGGTATAACAGAAGTCAAAGGCAGCAATCGATGGACGAGTTTCAGTTCCTGAAAAGGTCAGGGATTTTCTCCAATGGCGATTCTAAAAGCACTGCAGGTTCGGTTTCTGACCCTTCAATCAACTTCTCAAGGCCATTTTACCTTCCCAACCACTTGGACAAGTGCTCAACGAAGGCTCGGTGA 2313 0.4747 MDSSQESSLSANVAGLVDNASLKRKNSKLDGVPVYVKELIAGGVAGTLSRTAVAPLERVKILRQTRTPGFHSLGVYQSLNKLMKNEGLPGLYKGNGASVIRIIPYAALHFMTYERYKCWILENCPTLGSGPVIDLLAGSAAGGTSTLCTYPLDLARTKLAYRVVDTRGSIKGVMEDVHSRTAHNGIKGVLTRAYKERGVRGLYRGVALAGLFGQTLTYPIDVVKRQMQVGSLQNSAHGDVRYRNAFAELRIIVANQGGRQLFAGMSINYIRVAMMPDCSISGDWFHYIRHDEGLAWRSTPAEDCLVAFAEIVLMEYASRGRLAGMGASGKWVRSLIGLRKSDKDDHAKEGDGKSKKWRLWRSSSGDMASWKGFRGNHRAASEGSDSPVANAFTAAMATVIRAPPKDFRLVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQMILNERRTKADLLKQAEEGWCDSKGTLEDVKAKLQMRQEGAFKRERVIAYSLSQKQWRSTPCSNARTNTSLKNFEIDNSNWGWSWLERWMAAKPWETRLMEQSQTEASEKIKTPPPKKFVDSLANSNSKPLEQGLVKVRKNNVSTRISARPPIAGQTTRSSSSPSSEFRYDESSASSSICTSTTPISGNTVLASERTEDSNASRPSYMNLTESTKAKQKASNVVGYNRSQRQQSMDEFQFLKRSGIFSNGDSKSTAGSVSDPSINFSRPFYLPNHLDKCSTKAR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0765 770 ProSiteProfiles Solute carrier (Solcar) repeat profile. 197 291 IPR018108 -
Lele26g0765 770 Gene3D Mitochondrial carrier domain 33 207 IPR023395 -
Lele26g0765 770 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 119 IPR018108 -
Lele26g0765 770 SMART iq_5 411 433 IPR000048 GO:0005515
Lele26g0765 770 SMART iq_5 434 455 IPR000048 GO:0005515
Lele26g0765 770 Pfam IQ calmodulin-binding motif 414 433 IPR000048 GO:0005515
Lele26g0765 770 ProSiteProfiles IQ motif profile. 412 440 IPR000048 GO:0005515
Lele26g0765 770 ProSiteProfiles IQ motif profile. 436 463 IPR000048 GO:0005515
Lele26g0765 770 Pfam Mitochondrial carrier protein 131 207 IPR018108 -
Lele26g0765 770 Pfam Mitochondrial carrier protein 35 121 IPR018108 -
Lele26g0765 770 Pfam Mitochondrial carrier protein 207 273 IPR018108 -
Lele26g0765 770 PANTHER IQ-DOMAIN 5-RELATED 325 728 - -
Lele26g0765 770 Gene3D Mitochondrial carrier domain 208 280 IPR023395 -
Lele26g0765 770 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Lele26g0765 770 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Lele26g0765 770 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Lele26g0765 770 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Lele26g0765 770 FunFam IQ-domain 11 411 462 - -
Lele26g0765 770 MobiDBLite consensus disorder prediction 633 692 - -
Lele26g0765 770 SUPERFAMILY Mitochondrial carrier 36 275 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0765 Lele-ChrLele26 4870336 4878673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0765 325 764 IQD Protein Family AT2G26180 62.247 3.45e-153 451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0765 26 4870336 4878673 Lele27g1317 27 19873207 19875901 hybridization
Lele26g0765 26 4870336 4878673 Lele28g0753 28 4792764 4799971 hybridization