Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0760 ATGGAAGACTACATTCAGACCAGGCCTCAAAAGCCCCCGACCCTTGGACGATATGACTCTCTCATATTTGCCCTCACCGCGCGTTCTCTCTCTGCTACGTTAACTCCAGCCTTCGAAGATCTGAGGAGTTTGGGGAATCCTGACCCCATAATCCACTCCCATAAGTATCCTGACCCCATAATCCACTCCCATAAGTACTCTTTTATACTTGCTGCTTCTTCTACTCTCTGTGAAAGATCCGTTTTTGTGATGGGATTTGCAATCATGGCTGGCGTGGCACCAGAAGGGTCACAATTTGATGCTCGTCAATTTGATACTAAGATGAGTGAATTACTTGGAAATGAAGGGCAGGACTTTTTTACTAGTTATGATGAAGTTTATGAAAGCTTTGATGCTATGGGATTGCAGGAGAACCTTCTGAGAGGCATTTATGCTTATGGTTTTGAGAAGCCCTCTGCAATTCAGCAAAGAGGGATTGTTCCTTTCTGCAAAGGTCTTGATGTGATTCAGCAGGCACAATCTGGAACTGGTAAAACTGCTACTTTTTGTTCTGGAGTTTTGCAGCAGCTTGATTACAGCTTAGTTGAATGCCAAGCATTGGTTCTTGCTCCTACTCGTGAACTTGCACAACAAATTGAGAAGGTCATGCGAGCGCTGGGCGACTATCTTGGTGTCAAGGTTCATGCTTGTGTGGGTGGCACCAGTGTCCGAGAAGACCAGCGTATCCTCTCAGCTGGGGTACATGTTGTTGTTGGTACCCCTGGTCGTGTGTTCGACATGCTTCGTAGACAATCTCTCCGCCCTGATTACATTAAAATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGGGGTTTCAAGGATCAGATCTATGATATTTTCCAGCTGTTGCCACCAAAAATTCAGGTTGGGGTTTTCTCCGCCACTATGCCACCTGAGGCTCTTGAGATTACAAGGAAGTTCATGAATAAACCTGTGAGGATCTTGGTGAAGCGTGATGAGCTTACCTTGGAAGGGATCAAGCAATTTTACGTCAATGTTGAGAGAGAGGAATGGAAGCTGGAGACACTTTGTGATCTTTATGAGACACTGGCAATTACCCAGAGTGTTATCTTTGTGAACACCAGGCGCAAGGTGGATTGGCTTACGGACAAGATGCGCAGCCGTGATCACACTGTTTCTGCAACCCATGGAGATATGGACCAAAACACAAGGGACATCATCATGAGGGAATTCCGTTCTGGGTCTTCCCGCGTTTTAATCACCACAGATTTATTGGCCCGTGGTATTGATGTCCAGCAAGTTTCTCTCGTGATTAATTACGATCTCCCAACCCAGCCGGAGAACTACCTCCATCGAATTGGTCGTAGCGGTCGTTTTGGGAGGAAGGGTGTCGCTATTAATTTTGTGACCAAGGACGATGATAGGATGCTGTTTGACATTCAAAAGTTTTATAATGTCGTGATTGAAGAGCTGCCGGCCAATGTTGCTGATCTCCTTTGA 1506 0.4582 MEDYIQTRPQKPPTLGRYDSLIFALTARSLSATLTPAFEDLRSLGNPDPIIHSHKYPDPIIHSHKYSFILAASSTLCERSVFVMGFAIMAGVAPEGSQFDARQFDTKMSELLGNEGQDFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEREEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDDRMLFDIQKFYNVVIEELPANVADLL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0760 501 SMART ultradead3 147 344 IPR014001 -
Lele26g0760 501 Gene3D - 118 336 IPR027417 -
Lele26g0760 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 482 IPR027417 -
Lele26g0760 501 SMART helicmild6 381 462 IPR001650 -
Lele26g0760 501 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 275 283 IPR000629 -
Lele26g0760 501 Gene3D - 337 501 IPR027417 -
Lele26g0760 501 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 159 329 IPR014001 -
Lele26g0760 501 CDD SF2_C_DEAD 341 471 - -
Lele26g0760 501 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 128 156 IPR014014 GO:0003724
Lele26g0760 501 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 340 501 IPR001650 -
Lele26g0760 501 FunFam Eukaryotic initiation factor 4A-II 116 335 - -
Lele26g0760 501 CDD DEADc_EIF4A 132 330 - -
Lele26g0760 501 Pfam DEAD/DEAH box helicase 153 314 IPR011545 GO:0003676|GO:0005524
Lele26g0760 501 Pfam Helicase conserved C-terminal domain 354 462 IPR001650 -
Lele26g0760 501 FunFam Eukaryotic initiation factor 4A-III 336 501 - -
Lele26g0760 501 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 125 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0760 Lele-ChrLele26 4842268 4846639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0760 89 501 Eukaryotic Initiation Factors Gene Family AT1G72730 89.130 0.0 770