LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g0750	ATGGCAACGGACACGTGTCCGTTTCAGTTGAGCCCTCAAAACCTCACGAAACTCCACAACCTCCCTCCATGGAACCTATTGTTAAGGGTCTTCCCGAATTCTTCTGTTCGTCAGAGTGGTTACTCCAAAGTGGCGAAGATGAGTTTAGGTGCAGCCGAGGACGATTCGGCTTCAGAAATTCATCTCCCAGCGGAAATAGACTGGCACATGCTTGACAAATCCAAATTCTTCTTCTTAGGCGCCGCCTTATTTTCTGGCGTATCTACCGCCCTTTATCCTATTATTGTGTTGAAGACCCGCCAGCAGGTTTGTTCTTCTCAGATTTCTTGCTTCCAGATGTCCTTTTCCGTCATGCGCTATGAAGGCTTTAGAGGGTTTTACAAAGGTTTTGGTACCTCTTTGACCGGAACAATCCCTGCTCGAGCACTTTACATGGGTACACTTGAAGTCACCAAGAGTAATGTGGGCTCTGCTATTGCTGGTTTGGGATTTTCAGATAACACTGCCACCGCCATAGGTAATGCAGCTGCAGGAGTGAGTTCTGCTATGGCAGCACAACTAGTTTGGACCCCAATTGATGTGGTGAGTCAAAGACTCATGGTCTGCGGTAGCAAGAACATTCTCTCCAATGTTCATTGTCGGAATTACAGGAATGGTTTTGATGCCTTCAGGAAAATTATTTACACCGATGGACTGCGAGGTTTATATAGAGGATTTGGAATTTCCATATTGACTTATGCACCATCCAATGCTGTGTGGTGGACTTCTTACTCTATGGTCCATAGGTTCATCTGGGGTTCTTTTGGTTGCTACATGGGTAAGAAGGACGATAGCAAATTTGCCAATGGCTATGGTTTTAGACCTGATTCCAAGGCCTTGGTTGCAGTCCAAGGGTTAAGTGCAGTTGTGGCCAGTGGGGTTTCGGCTATTATCACTATGCCACTTGACACCATTAAGACAAGGTTGCAGGTTTTGGATGCAGAGGAGAATGGACGAAGGAAACCATTAACTGCTATGCAGACTGTTAGGAATCTGGTGAAGGAAGGTGGCTTTATTGCTTGTTACAGAGGATTGGGGCCAAGGTGGGCTTCAATGTCCATGTCTGCCACAACCATGATTACTACCTACGAGTTTTTGAAACGAATGTCCACCAAGAGGCAAGAGAATTTATCTGCATAA	1179	0.458	MATDTCPFQLSPQNLTKLHNLPPWNLLLRVFPNSSVRQSGYSKVAKMSLGAAEDDSASEIHLPAEIDWHMLDKSKFFFLGAALFSGVSTALYPIIVLKTRQQVCSSQISCFQMSFSVMRYEGFRGFYKGFGTSLTGTIPARALYMGTLEVTKSNVGSAIAGLGFSDNTATAIGNAAAGVSSAMAAQLVWTPIDVVSQRLMVCGSKNILSNVHCRNYRNGFDAFRKIIYTDGLRGLYRGFGISILTYAPSNAVWWTSYSMVHRFIWGSFGCYMGKKDDSKFANGYGFRPDSKALVAVQGLSAVVASGVSAIITMPLDTIKTRLQVLDAEENGRRKPLTAMQTVRNLVKEGGFIACYRGLGPRWASMSMSATTMITTYEFLKRMSTKRQENLSA	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g0750	392	SUPERFAMILY	Mitochondrial carrier	69	379	IPR023395	-
	Lele26g0750	392	PRINTS	Mitochondrial carrier protein signature	236	254	IPR002067	GO:0055085
	Lele26g0750	392	PRINTS	Mitochondrial carrier protein signature	301	323	IPR002067	GO:0055085
	Lele26g0750	392	PRINTS	Mitochondrial carrier protein signature	89	103	IPR002067	GO:0055085
	Lele26g0750	392	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	72	154	IPR018108	-
	Lele26g0750	392	Gene3D	Mitochondrial carrier domain	211	392	IPR023395	-
	Lele26g0750	392	Gene3D	Mitochondrial carrier domain	24	210	IPR023395	-
	Lele26g0750	392	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	169	263	IPR018108	-
	Lele26g0750	392	PANTHER	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J	56	388	-	-
	Lele26g0750	392	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	292	382	IPR018108	-
	Lele26g0750	392	Pfam	Mitochondrial carrier protein	82	154	IPR018108	-
	Lele26g0750	392	Pfam	Mitochondrial carrier protein	170	265	IPR018108	-
	Lele26g0750	392	Pfam	Mitochondrial carrier protein	296	385	IPR018108	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g0750	Lele-ChrLele26	4779231	4781008	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele26g0750	47	388	Chloroplast and Mitochondria Gene Families	AT1G72820	68.116	6.91e-170	477