Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0749 ATGGACGGAGGTGCTCCCTACAATCCTCGCACGGTCGAAGAGGTCTTCAGGGATTTCAAGGGTCGCCGTGCTGGCCTGATTAAGGCCCTCACCACCGATGTTGAAGAGTTCTATCAGCAGTGTGATCCTGAGAAGGAGAACCTGTGCCTTTATGGATTTCCTAGCGAGCAGTGGGAAGTCAATCTGCCTGCTGAGGAGGTGCCTCCAGAACTTCCAGAACCTGCGCTGGGTATTAACTTTGCCAGAGATGGGATGCAAGAAAAAGACTGGCTATCTTTGGTTGCTGTTCACAGTGATGCGTGGCTACTTGCCGTAGCCTTTTATTTTGGTGCTAGATTTGGATTTGATAAGGCTGATAGGAAGCGATTGTTTAACATGATAAATGATCTTCCAACAATATTTGAGGTTGTTACGGGGATGGCCAAGAAACAAGGGAAGGAGAAGTCATCAGTTTCGAACCATAGCAGTAACAAATCCAAATCGAACTCTAAGCAAACGCAGAGAGGATCTGAATCTCAAGGAAAGTATTCAAAAGCAATGCAGTTAAAGGATGAAGATGAGGAGGGTTTGGATGAAGAAGATGAGGAGGAGCACGGAGAGACACTTTGTGGAGCATGTGGAGAGAACTATGCAGCTGATGAGTTCTGGATTTGCTGTGACATCTGTGAGAAATGGTTTCATGGGAAGTGTGTGAAGATCACCCCTGCAAGGGCTGAACATATCAAGCAGTACAAATGTCCGTCCTGTAGCAACAAGAGAGCTCGACCTTGA 771 0.4682 MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGKEKSSVSNHSSNKSKSNSKQTQRGSESQGKYSKAMQLKDEDEEGLDEEDEEEHGETLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0749 256 CDD PHD_AL_plant 202 252 IPR044104 -
Lele26g0749 256 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Lele26g0749 256 PANTHER CPG BINDING PROTEIN 8 255 IPR045104 GO:0006355|GO:0042393
Lele26g0749 256 MobiDBLite consensus disorder prediction 150 177 - -
Lele26g0749 256 ProSiteProfiles Zinc finger PHD-type profile. 200 252 IPR019787 -
Lele26g0749 256 SUPERFAMILY FYVE/PHD zinc finger 192 253 IPR011011 -
Lele26g0749 256 FunFam PHD finger alfin-like protein 195 251 - -
Lele26g0749 256 SMART PHD_3 202 250 IPR001965 -
Lele26g0749 256 MobiDBLite consensus disorder prediction 145 195 - -
Lele26g0749 256 ProSitePatterns Zinc finger PHD-type signature. 203 249 IPR019786 -
Lele26g0749 256 Pfam PHD-finger 203 252 IPR019787 -
Lele26g0749 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 251 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0749 Lele-ChrLele26 4775069 4777436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0749 1 255 Alfin-like Transcription Factor Family AT3G42790 78.125 4.51e-129 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Lele26g0749 Alfin 6.2e-70 No_clan