LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g0748	ATGGGAGATCCCTGGACTATTGTTCCGTACAATGACCCCTACGATTTCCCATTACCCCATGACATCCTCGATTTCCAGGATCATCATATTCCACCCCCTGCTGGTCCACCCATTGAGCACAATGCTTCTTCCTTCCCACAACAGAGTGATGCATTTTTTCAGAGTAATGATCCGAATTCGGGTCAAGTGATTCAAGATGCCCCAATGTGCGATTTTCCCCTTGAAGAGGGCAACTTTGTAGCGGGTCCATCTCAACTTCACGGGGAAAGCCTTCCAAGTCAAGAGAATATGCAGTCACAGAATTTCCCCAATGTGCTTCAATTTTCGCATTGGCCAGAAAATCCAGTCCCTTTTCATTGTAGTTGCTGCCAAGTTCTTAGAGAAATCATTCACACGAATGGGATTCAGTTCGCAAAACTGGAGATTCACGGAAGACTGGGTGTGATCTCTCATGCAATTCTTCTACAGAATATGAATGTGGGTTCCTCAGGCGGCGGTCAGCAAGTTCACATGTTCGATTTTTGCAGCAGAAGTATGGAGGATGTCAAGAATTTTATAAGGCAGTACTGTGCGGAGAAAAATGCAGGAGGCTACTTTACTTTGCCAGATCCACTGTCAGATTATTATGAAGCCCTCTCCATTGGAATGGAATGGAATGAAGATCTAAGTGACGAATTCCTTGACACGCACGCTGATAATTCAGGGGGAGCATCTGATGAGACCGGGGACATGGATAGGACTGCTAGGGCTAGTCTTGCAACGCAGAGGGAGAGAGCGGGGAAGATGAAGCTGAGTGATTTCAGGGAGGTGTTTCATCTACCTATTGAAGAAGCAGCGAGGCAAGTAAACTTATGTCCCACAGTTGTGAAGAAGATATGCCGTAAAGAAGGATTACCCAGATGGCCTCACAGAAAGATAAAGAGCATCATGAGGAAGATAAACATACTGAGAGGGAGTTTAAACTCAGCCGAGGCAGCGTCGAGGGCACAGACGGAGGCAGAAATTGAGAGACTTCGTCGAGAAATGATTGACCATTGTGGTGGAATGCTCCCAACTTCATTAATTTTGGATGCTTAA	1077	0.4596	MGDPWTIVPYNDPYDFPLPHDILDFQDHHIPPPAGPPIEHNASSFPQQSDAFFQSNDPNSGQVIQDAPMCDFPLEEGNFVAGPSQLHGESLPSQENMQSQNFPNVLQFSHWPENPVPFHCSCCQVLREIIHTNGIQFAKLEIHGRLGVISHAILLQNMNVGSSGGGQQVHMFDFCSRSMEDVKNFIRQYCAEKNAGGYFTLPDPLSDYYEALSIGMEWNEDLSDEFLDTHADNSGGASDETGDMDRTARASLATQRERAGKMKLSDFREVFHLPIEEAARQVNLCPTVVKKICRKEGLPRWPHRKIKSIMRKINILRGSLNSAEAASRAQTEAEIERLRREMIDHCGGMLPTSLILDA	358

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g0748	358	Pfam	RWP-RK domain	262	309	IPR003035	-
	Lele26g0748	358	Coils	Coil	321	341	-	-
	Lele26g0748	358	ProSiteProfiles	RWP-RK domain profile.	249	329	IPR003035	-
	Lele26g0748	358	MobiDBLite	consensus disorder prediction	31	58	-	-
	Lele26g0748	358	MobiDBLite	consensus disorder prediction	41	58	-	-
	Lele26g0748	358	PANTHER	PROTEIN RKD4	39	342	IPR044607	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g0748	Lele-ChrLele26	4773132	4774637	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele26g0748	183	343	AtRKD Transcription Factor Family	AT4G35590	27.528	1.16e-11	63.2

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	RWP-RK	Lele26g0748		RWP-RK	8.8e-20	No_clan