Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0744 ATGAGGAGTCCAAGTTGCTCTGGGGAAGTAGAAGAACTGAACAAAGGAGCATGGACTGCTCAAGAAGACAAGTTGCTCACTTCTTACATTATGGTCCACGGCGAAGGCAAGTGGACCCACATCCCTATAAGAGCTGGCTTGAATAGAGGTGGCAAAAGCTGTAGGCTTCGATGGTTGAACTATCTCAGGCCTGATATCAAGAGAGGTAACATCACCCAAGACGAAGAAGACCTCATTATCAGACTTCATAAACTTCTTGGTAACAGATGGTCTCTTATAGCTGGAAGGCTACCAGGAAGAACAGACAATGAAATCAAGAACTACTGGAACACTACCTTGGCGAAGAAGCTTAGAACACAATCTGCAGGCGCAACGTCTGAGAAACATCCATCCAGCAAATCAAGCGAGTCTGATGATATCACTCGACCACAAGTAATCCAAACGAAGGCCCGAAGATTAAAAAACGTGGTTATCCAACACTCTCCTAATTGTCCTGAGGAAACGTCCGCCGTCAACTCTCTAGCTTCCAACCAGTTAGGGCTTCACAAAGCTCATCACCTAGCTCCCCAGTTCACCAACCAGTTTCAGCAGGCTGTAGATGATCAATATCAGAATTCAGATATGAACTTGTTAGGTGCTGAACATAATGATGAGTTTCAAGATGAACTGAATGCCGTAGATTTTTTTAGAGAGTTTAACCTTGACAATAGCATGGCCATGGCCATGGATGCGCAAGCAGACGGGTTCTCACATATCGACGAACTTGTCAATTGTGGGACAAGTGATGGATTCAGGAACATTGGCACTACTGATCTGGATTTAATGACATTCATGTTGGATTCTGCCTCTGGCGATTGGCCACAGGTGGCTGGCATACCTTTTGCTATTCGTGTGGGAGGACCCCACAAATTCACGTCTGAGCTTCTGATGAAGCATGAGAACCCTGACATTGGCGTAAGAAGGGATCAGTGGTTAGATGATGAGTTTCGTAAATGTGTCGCTCGTTTGAAGCTAGTGATTTTCCTTTGGACTCGGGGGTTCTTGAATGACCACGTTCTTGCATCTGCCAGCCTTGCTGTCAATATTGTGCGCTATGAGAGTTCTTGGGACGAACACAAGAAGATAGTTGAGAGACCGCTTGGGTTTTCCTATTTAGTGGCTTATGAGTCGGGTGTTTTTGTTGAGGATATGTGTTATATTGCTGGTTATTACATGATTGAGCATTCTTATGCTGCTAGGATGTTCTACTTCTTTGAATCTCGCAACAGCAACCAGAACCCTTTTGTGCTTTGGGGGACGGGAGGACCTGGGTGTAGCAGCGAGTTGGCAATGTCTTATGAAAATGACCCTTTCAAAATTACTAACAACATGTTCTTTTTGTGGATTGACTATGGGTGGGATCGGGTCCCGAATCTTCTGTATGAGGACCAACTTAATGGGAATGATTTTAGTTATAACACTGCTAATGACCTTGACACTGGGTATAATGAAGTGGGAGCTGGCAATGACCTCTATGACTTCATGAAGGCCTTCTTTGCTGTATATCATATTCCTGTACTTACAGCTCAACTCCATAAGGGAAACAAAGCTAAAGAAGGAAGCCATATAAATATGAAAGATTACTGCTGTTTAGACACTTTGCTGCCAGCAGGTGCAAAAGTGAGAATGGGTTGGGGTCACCTGCGAAGGAGTGGGCAATTCAACTCGGGTGAGCCGAGTACCAGTGCGGAGGCTGCTCCTACCAACACCGAACAATCCGTACCTCGGCGATTCCCCCTGGCGGCTCAGCCTGAGATCATGAGAGCGGCTGAGAAGGATGATCAGTATGCCTCTTTCGTCTATGAAGCCTGTCGCGACGCCTTCCGTCACCTCTTTGGTACTAGAGTTGCAGTTACCTACCAAAGTGAGACAAAACTATTGGGACAAATGCTTTACTATGTGCTGACAACAGGTTCAGGACAACAGACGCTCGGAGAGGAATACTGTGACATCACTCAGGTTGGAGGACCTTATGGACTTCCTCCTACTCCTGCAAGGCGTGCTCTTTTCATTGTATACCAGACAGCTGTTCCATATATTGCAGAACGAATAAGTTCTAGAATTGCTTCCCGAGGAATTGCCCTTGCTGATTCACAATCTGCTGAGATCTATGGTGAAAATGGTACCATTAGGAGTAGTGAATTTCAAACTTCTGATGTGAGTGAACTTCCCTCTTCTACATCAGGGCAATCTCTTACAACTCTGACAAGGTTGAAGGAGAAACTGAGAGGATTTTGGTTGCATGCAGTTCAGAGATGGCCTACGATGCTTCCTATGGTTCGTGAGTTGTTGCAATTGGTTCTTCGTGCTAATCTTATGCTCTTCTATTTTGAAGGTCTCTATTATCATATACCAAAACGTGCTGCAGGAATTCGATATGTCTTCATTGGAAAATCATTAAATCAAAGGCCCAGATACCAAATTTTGGGTGTATTTCTGTTGATTCAGCTTTGTATAATTGCTGCTGAAGGGCTACGTCGAAGCAATTTATCTTCAATTGCAAGTTCAGTTCATCAGACATCCTTTGGGACGCACCAGGGATCAGCAGGACGAGGTTTGCCTGTTTTAAATGAAGAGGGTCTTCCGGCATCTTCTGATACAGACAAAGGAAATTGGTTATCTGACACTACACATTCTGAGTCCCAAGCAACTAGTGGAGTGAGCAAATGCACGCTCTGCCTGAGTAATCGGCAACACCCAACAGCCACTTCCTGTGGCCATGTGTTTTGCTGGAACTGTATAACGGAATGGTGCAACGAAAAGCCAGAATGCCCTCTTTGCCGCACCCCCTTAACACACTCCAATCTAGTGTGCCTGTATCATTCAGACTTCTAG 2874 0.4513 MRSPSCSGEVEELNKGAWTAQEDKLLTSYIMVHGEGKWTHIPIRAGLNRGGKSCRLRWLNYLRPDIKRGNITQDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLAKKLRTQSAGATSEKHPSSKSSESDDITRPQVIQTKARRLKNVVIQHSPNCPEETSAVNSLASNQLGLHKAHHLAPQFTNQFQQAVDDQYQNSDMNLLGAEHNDEFQDELNAVDFFREFNLDNSMAMAMDAQADGFSHIDELVNCGTSDGFRNIGTTDLDLMTFMLDSASGDWPQVAGIPFAIRVGGPHKFTSELLMKHENPDIGVRRDQWLDDEFRKCVARLKLVIFLWTRGFLNDHVLASASLAVNIVRYESSWDEHKKIVERPLGFSYLVAYESGVFVEDMCYIAGYYMIEHSYAARMFYFFESRNSNQNPFVLWGTGGPGCSSELAMSYENDPFKITNNMFFLWIDYGWDRVPNLLYEDQLNGNDFSYNTANDLDTGYNEVGAGNDLYDFMKAFFAVYHIPVLTAQLHKGNKAKEGSHINMKDYCCLDTLLPAGAKVRMGWGHLRRSGQFNSGEPSTSAEAAPTNTEQSVPRRFPLAAQPEIMRAAEKDDQYASFVYEACRDAFRHLFGTRVAVTYQSETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVGGPYGLPPTPARRALFIVYQTAVPYIAERISSRIASRGIALADSQSAEIYGENGTIRSSEFQTSDVSELPSSTSGQSLTTLTRLKEKLRGFWLHAVQRWPTMLPMVRELLQLVLRANLMLFYFEGLYYHIPKRAAGIRYVFIGKSLNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHQTSFGTHQGSAGRGLPVLNEEGLPASSDTDKGNWLSDTTHSESQATSGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWCNEKPECPLCRTPLTHSNLVCLYHSDF 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0744 957 MobiDBLite consensus disorder prediction 566 589 - -
Lele26g0744 957 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 62 IPR017930 -
Lele26g0744 957 ProSiteProfiles Zinc finger RING-type profile. 903 941 IPR001841 -
Lele26g0744 957 SMART sant 67 115 IPR001005 -
Lele26g0744 957 SMART sant 14 64 IPR001005 -
Lele26g0744 957 CDD SANT 72 113 IPR001005 -
Lele26g0744 957 Gene3D alpha/beta hydrolase 394 655 IPR029058 -
Lele26g0744 957 SUPERFAMILY alpha/beta-Hydrolases 399 549 IPR029058 -
Lele26g0744 957 CDD RING-HC_PEX10 902 941 - -
Lele26g0744 957 Pfam Ring finger domain 902 941 IPR001841 -
Lele26g0744 957 CDD SANT 17 62 IPR001005 -
Lele26g0744 957 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele26g0744 957 MobiDBLite consensus disorder prediction 873 893 - -
Lele26g0744 957 FunFam Peroxisome biogenesis factor 10 878 954 - -
Lele26g0744 957 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele26g0744 957 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 592 955 - -
Lele26g0744 957 Pfam Pex2 / Pex12 amino terminal region 606 840 IPR006845 -
Lele26g0744 957 FunFam Transcription factor TT2 71 141 - -
Lele26g0744 957 FunFam Myb transcription factor 15 67 - -
Lele26g0744 957 Pfam Serine carboxypeptidase 400 514 IPR001563 GO:0004185|GO:0006508
Lele26g0744 957 SUPERFAMILY RING/U-box 902 946 - -
Lele26g0744 957 MobiDBLite consensus disorder prediction 119 143 - -
Lele26g0744 957 Gene3D - 71 143 - -
Lele26g0744 957 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Lele26g0744 957 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele26g0744 957 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Lele26g0744 957 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele26g0744 957 SMART ring_2 903 940 IPR001841 -
Lele26g0744 957 Gene3D - 15 67 - -
Lele26g0744 957 ProSitePatterns Zinc finger RING-type signature. 918 927 IPR017907 -
Lele26g0744 957 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 876 954 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0744 Lele-ChrLele26 4727561 4737648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0744 2 162 MYB Transcription Factor Family AT4G38620 55.280 1.63e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g0744 Pex2_Pex12 1e-46 No_clan