Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0743 ATGGGGAGGAGTCCGTGTTGCTCCAAGGAAGGACTGAAAAGAGGAGCCTGGACTGCCCTTGAGGACAAGTTACTCTTCTCTTACGTCAAAGCCTACGGCGAAGGCAAATGGCGAAACCTCCCCCGTCGAGCTGGCTTGAAAAGATGCGGCCAAAGTTGCAGGCTTCGCTGGGTCAACTATCTCCGGCCTAACATTAAGCGAGGCAACATCACTCGCGATGAAGAAGATCTCATCCTCAGGCTCCATAAACTTCTTGGTAACAGATGGTCCCTCATAGCTGCGAGACTTCCTGGGAGAACAGACAATGAAATCAAGAACTACTGGAACACTACTCTTTCAAAGAAGCTTAGACCCTTGGAAACACCTCCTCCCCGCATATCAACAACAGGCAAGGAAGTAGCTGATGATCCTCAGCCACAACCACAGTTAATTCAAACCAAGCCGAGTCGGTGTAATAACCTAGTTATCCGGCCGCCCCAACATTCAAACCAAAGCTACTCCAACATCAACTATTGGGATTCAAACCAGCTGATAGAGGTTGATGCAGCTCCCATAGCAACAAATCAATCTGAGGAGGGTTCACGTTCTCCGAAACCTCAAGTTCATGCAGACGAAGATGGGGCTCATAATGAAAATCATAATTCTGATGTGAATATGTGGGGTTCTGGAAGCGATGATGATCAGTTTGGTCTGAGTGCAGAAAATTTGTACGGAGACGCCGGGATCTTTATTGACGAACTTATGGTCAACGGCTGGGCCTCCACAACGAGTGGCTTCCATGTCCCCGAGAATTATGGCGCTATGGACTTGGAACCATTGCCCCTCCTGTTCGACTATGGGGATTGGCCCTGA 852 0.4906 MGRSPCCSKEGLKRGAWTALEDKLLFSYVKAYGEGKWRNLPRRAGLKRCGQSCRLRWVNYLRPNIKRGNITRDEEDLILRLHKLLGNRWSLIAARLPGRTDNEIKNYWNTTLSKKLRPLETPPPRISTTGKEVADDPQPQPQLIQTKPSRCNNLVIRPPQHSNQSYSNINYWDSNQLIEVDAAPIATNQSEEGSRSPKPQVHADEDGAHNENHNSDVNMWGSGSDDDQFGLSAENLYGDAGIFIDELMVNGWASTTSGFHVPENYGAMDLEPLPLLFDYGDWP 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0743 283 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 199 - -
Lele26g0743 283 FunFam MYB-related transcription factor 13 66 - -
Lele26g0743 283 Gene3D - 70 136 - -
Lele26g0743 283 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele26g0743 283 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele26g0743 283 Gene3D - 7 66 - -
Lele26g0743 283 SMART sant 66 114 IPR001005 -
Lele26g0743 283 SMART sant 13 63 IPR001005 -
Lele26g0743 283 MobiDBLite consensus disorder prediction 197 212 - -
Lele26g0743 283 CDD SANT 71 112 IPR001005 -
Lele26g0743 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele26g0743 283 MobiDBLite consensus disorder prediction 116 145 - -
Lele26g0743 283 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele26g0743 283 CDD SANT 16 61 IPR001005 -
Lele26g0743 283 MobiDBLite consensus disorder prediction 187 214 - -
Lele26g0743 283 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele26g0743 283 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele26g0743 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0743 Lele-ChrLele26 4716554 4717566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0743 4 116 MYB Transcription Factor Family AT3G13540 74.336 2.87e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g0743 Myb_DNA-binding 2.5e-12 CL0123