Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0742 ATGGGGAGCACTCGTTCGCGCAGTAATGAAGGGCAGAAAAGGGAGCCTTGGACCGCTCAAGAAGACCAAATACTGGCAGCCTATATCAGCGCACATGGCGAAGGCAAATGGAAAAACATCCCCAAACAAACCGGTCTGAGGAGAAGTGGAAAATCGTGCAGGCTTCGGTGGATGAATTACCTGAGGCCAGATATCAAGAGAGGCAACATCACTGAAGACGAAGAAGACCTCATTCTCAGGCTCCACAAGCTCTTGGGCAACAGATGGTCACTGATAGCGGCAAGACTCCCGGGGCGAACAGACAATGAAATCAAGAACTACTGGAACACCAACTTGGCCAAGAAGGAGCAAGAGAAGCGATCCAAAAGCGAAATTGCAGAATCAAGAGTATCCCAGCAGGAGGTTTTGGAGATGGTTCCTCAAAGCACTCACGTGGCATTAGACACGTTAGCTCCGATGGAACCTCATGGAGATTCTGATGTTGCGGCAGGGGAATCTGTTGCTGTTGATGGACGATCATCGTCGGGCGAAGAAAACGTGGATGGGGCTTTGATGGATTTTGATTTCAAGGACGTGGACATTTTGGAGTTTCTGGACTTGGATTTCACTGGACTTGCAGATTTTGACATGTTGATTAACATGGACGATTCGCAGCAAGAAGGAAGGCAGAGCGATACTCGGTCATTTTCATTTTCTGAGGAAACAGATGCTAAGTGGGGGAACCAGAATGTCTCCGATTAG 741 0.4858 MGSTRSRSNEGQKREPWTAQEDQILAAYISAHGEGKWKNIPKQTGLRRSGKSCRLRWMNYLRPDIKRGNITEDEEDLILRLHKLLGNRWSLIAARLPGRTDNEIKNYWNTNLAKKEQEKRSKSEIAESRVSQQEVLEMVPQSTHVALDTLAPMEPHGDSDVAAGESVAVDGRSSSGEENVDGALMDFDFKDVDILEFLDLDFTGLADFDMLINMDDSQQEGRQSDTRSFSFSEETDAKWGNQNVSD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0742 246 Gene3D - 71 138 - -
Lele26g0742 246 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele26g0742 246 FunFam MYB-related transcription factor 13 66 - -
Lele26g0742 246 MobiDBLite consensus disorder prediction 217 246 - -
Lele26g0742 246 SMART sant 66 114 IPR001005 -
Lele26g0742 246 SMART sant 13 63 IPR001005 -
Lele26g0742 246 CDD SANT 71 112 IPR001005 -
Lele26g0742 246 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele26g0742 246 Gene3D - 6 67 - -
Lele26g0742 246 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele26g0742 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele26g0742 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele26g0742 246 CDD SANT 16 61 IPR001005 -
Lele26g0742 246 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 133 - -
Lele26g0742 246 Pfam Myb-like DNA-binding domain 17 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0742 Lele-ChrLele26 4706543 4707446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0742 3 115 MYB Transcription Factor Family AT3G13540 69.027 1.84e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g0742 Myb_DNA-bind_6 6.8e-15 CL0123