Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0729 ATGGTGTATCGCATATTCTCCATGAAGTGGTTGTGGTTAGATTGGACTGATTACCCAACGTTGCAGGAAAAACAACCTTTGAAACGACCAGGTTCATTCCAGAGGTTGTGCCTCTCGGACATAAGCAATTCCAGCTCATCTCAGGCCATGGACGATCTCTCAATTTCTCTGGCCGGTTCAAAACTTCATATATTCAGCCTAGAGGAGCTCAGGGAAGCAACCCATAATTTCTCATGGAGCAATCTGCTTGGTGAAGGCGGGTTCGGACCCGTGCACAAGGGATTCTTTGATGAAAAACTTAGGCGTGGATTGAAAGCTCAGCCTGTTGCTGTCAAACGCCTCGACTTAGGTGGCTTGCAAGGTCATAGGGAATGGCTGGCAGAGATTATCTTCCTTGGACAGCTGCAACATCCACATCTTGTTAAGTTGATTGGGTACTGTTATGAAGAGGAGCATAGGCTTTTGGTTTATGAATACATGCCAAGAGGAAGCTTGGAGAACCAGATCTTCAGGAGATACTCTGCTGTGTTGCCATGGTCAACCAGGATGAAAATTGCACTAGGCGCAGCTAAGGGCCTGGCCTTCCTTCATGAAGTAGATAAACCAGTCATTTACAGAGATTTCAAAGCTTCAAACATTTTGCTGGACTCGGATTACACAGCCAAACTTTCAGATTTCGGGTTGGCAAAGGATGGTCCAGAAGGAGAAGAAACACATGTAACAACACGCGTAATGGGGACACAGGGCTATGCTGCTCCAGAGGATCCGAAAAAGCTGTATCGAGTGATAGATTCCAGATTGGAAGGTCAATTTCCTGCGAGAGGAGCTCGAAAGGTGGCTGCTTTGGCTTACAAATGCTTGAGTCACCACCCGAATCCAAGGCCCACCATGTCCGATGTGGTTGCCATATTGGAGACACTTCAGGGCTTTGACGATGTTTTCATAGGACCATTTGTCCAACTGACTCTGATGCAGTTTGTGGCGCGACTAAAAACCAGAGAGAAGACAAAAGAAGCAGAAACAGAGCGTCGAGGGTCAACACGGATTAGTACTTGGGGTAATGGCGACCTTAGTGTCTGTTGCCGGTGCACTTACGGCGAACGATCGCCGGATTTTGTCGGCAGTGAACACCGGAGCATCGAGCCTTTCATTCGTTGGGTCGAGCTTCATTAGCCTTTGGTAAAGTGCTCCAATGTGACATTTTCTTTGACCGCAGGACATGCTTTGCAGTTTCTTCAACATAGTAGGAGTTATAGCACACATTTCTTTTGTGTTGCATCTTTCCTATGGACTACAACAATCGCTTTTACCCTTCATCGCACTGTTGTTAGGCACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCATCTATATGTTTGGGGTACCTCCCTAGTAGTGACAGTCATTCGCTCCTTTGGTAATGACCATAGACATTTTGGCACATTGTGTGGTTCATTTTATCTCGTTTTATATGCCACTTTGGGGTGCAATTCTTTACAATGGATGGCAGTCGGTATTTCAGACCGAAATTATGTCTCAGATACAAGAGATAACATGAAGGCTGTGAGTCGCTGGGGATACTATCCTCTGATTCTAATAGGATCGTTTGCATTTGGCACTATCAACCGTGTTCATGACTTTATTGAACCTGACCATAAGATCTTTTGGCTTTCATTTCTAGATGTTGCAACGGCTGCCCTCATGGGCCTTTTCAACTCAATAGCATATGGCCTCAATTCTTCTGTTCGTCGGGCAATTTGTGAGAGACTAAACATGTTTTCAAATTTTGACTGGTGGATTGAGAATCACTAA 1815 0.4529 MVYRIFSMKWLWLDWTDYPTLQEKQPLKRPGSFQRLCLSDISNSSSSQAMDDLSISLAGSKLHIFSLEELREATHNFSWSNLLGEGGFGPVHKGFFDEKLRRGLKAQPVAVKRLDLGGLQGHREWLAEIIFLGQLQHPHLVKLIGYCYEEEHRLLVYEYMPRGSLENQIFRRYSAVLPWSTRMKIALGAAKGLAFLHEVDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVTTRVMGTQGYAAPEDPKKLYRVIDSRLEGQFPARGARKVAALAYKCLSHHPNPRPTMSDVVAILETLQGFDDVFIGPFVQLTLMQFVARLKTREKTKEAETERRGSTRISTWGNGDLSVCCRCTYGERSPDFVGSEHRSIEPFIRWVELHXPLVKCSNVTFSLTAGHALQFLQHSRSYSTHFFCVASFLWTTTIAFTLHRTVVRHKTDVEDLEAMFHLYVWGTSLVVTVIRSFGNDHRHFGTLCGSFYLVLYATLGCNSLQWMAVGISDRNYVSDTRDNMKAVSRWGYYPLILIGSFAFGTINRVHDFIEPDHKIFWLSFLDVATAALMGLFNSIAYGLNSSVRRAICERLNMFSNFDWWIENH 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0729 604 Pfam Protein tyrosine and serine/threonine kinase 80 254 IPR001245 GO:0004672|GO:0006468
Lele26g0729 604 Gene3D Phosphorylase Kinase; domain 1 39 159 - -
Lele26g0729 604 Gene3D Transferase(Phosphotransferase) domain 1 160 254 - -
Lele26g0729 604 Gene3D Transferase(Phosphotransferase) domain 1 255 313 - -
Lele26g0729 604 FunFam Serine/threonine-protein kinase BIK1 43 159 - -
Lele26g0729 604 FunFam Os07g0541700 protein 160 247 - -
Lele26g0729 604 PRINTS GCR1-cAMP receptor family signature 561 580 IPR022343 -
Lele26g0729 604 PRINTS GCR1-cAMP receptor family signature 413 431 IPR022343 -
Lele26g0729 604 SUPERFAMILY Protein kinase-like (PK-like) 60 312 IPR011009 -
Lele26g0729 604 PRINTS Putative plant GPCR, GCR1, signature 415 428 IPR022340 -
Lele26g0729 604 PRINTS Putative plant GPCR, GCR1, signature 430 448 IPR022340 -
Lele26g0729 604 PRINTS Putative plant GPCR, GCR1, signature 453 468 IPR022340 -
Lele26g0729 604 ProSiteProfiles Protein kinase domain profile. 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0729 604 PANTHER OS01G0588500 PROTEIN-RELATED 257 308 - -
Lele26g0729 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Lele26g0729 604 Gene3D - 414 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0729 Lele-ChrLele26 4613751 4622877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0729 63 304 Glycoside Hydrolase AT3G07070 42.712 1.02e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele26g0729 PK_Tyr_Ser-Thr 9e-32 CL0016