Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0726 ATGGCTTCCTCAATACCTAATGATTCCGACCACACTCTGAGAACTACTAGCGACTCTTGCTCCACTAAGTACAAAGGCGTTCGAAAGCGAAAATGGGGCAAATGGGTGTCTGAAATCAGACTTCCCAACAGCCGCGAGCGCATTTGGTTGGGCTCCTATGACTCGCCGGAGAAGGCGGCTCGAGCCTTCGACGCCGCCCTCTACTGCCTGCGCGGTCGCCATGCCAATTTCAACTTCCCGGACACCCCTCTGGAGTTGGAGATGATCGCTGTCTCCGGTGATCATCGACCCCAGTCTCGTTCTGCTCAAGAAATCCAAGAGCTTGCTGCTAGGTTTGCCAACGAGTACCAGCAGGAGCCACCGATGGTTCAGCAGTCTTCGGAAGCGGCCGCTCCTTTTTCCTGCGAATCGGATGGCGTTACTGAGAGTGGTGATCCTGTAGAGGTGGACAACGGTGTCGGGGACATAAGGGGCATTAACGACTGGTCGTTTTTGAAGTCACTGGATGACACTGGCTCCGCCAATGACAGTAATTGTAATTATAATGGTTTCTGCTCTGGATTCGACAAGATGCACTCTGGTGAGTTATTGTTTCCCACATCGCCACCTCATTTGCTCATCGATCATAATGTTAGTGACAATGGCGGTAATGCAATGGAATGCGACGACGCTTTTTCCCAACAATCATTGTTCCTTTGGAACTTTTGA 708 0.5127 MASSIPNDSDHTLRTTSDSCSTKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGRHANFNFPDTPLELEMIAVSGDHRPQSRSAQEIQELAARFANEYQQEPPMVQQSSEAAAPFSCESDGVTESGDPVEVDNGVGDIRGINDWSFLKSLDDTGSANDSNCNYNGFCSGFDKMHSGELLFPTSPPHLLIDHNVSDNGGNAMECDDAFSQQSLFLWNF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0726 235 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Lele26g0726 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 132 - -
Lele26g0726 235 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Lele26g0726 235 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Lele26g0726 235 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Lele26g0726 235 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lele26g0726 235 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Lele26g0726 235 MobiDBLite consensus disorder prediction 1 20 - -
Lele26g0726 235 CDD AP2 22 82 IPR001471 GO:0003700|GO:0006355
Lele26g0726 235 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lele26g0726 235 FunFam Ethylene-responsive transcription factor 2 22 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0726 Lele-ChrLele26 4594670 4595377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0726 13 235 AP2-EREBP Transcription Factor Family AT1G19210 44.348 1.69e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g0726 AP2 1.2e-12 CL0081