Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0718 ATGGACATGGTGGGGCGCGCGGCTATGACGGCGATGAAGCTCTCAACTTATATTGGTCGTGTATTGCTTCATCATAACATGGTTTGCTTCTACCATCAATTGTCTAACCGACCCCCGCAATTTGGGGAAGAATGTGATTTCATTAATAATGAAGGGGTTGCTTCTTTTTCTCATTTTTCCTGGAGAGTGTGCAACAGTACTGATGACGATAGAGTGCTATTACGAGGCAACTCATTTACAAAAAAAGTTGAGTTGAAACAGGCGATTGCTATGTCACAAGGGTACAAGAATGTTGCAAAGGCTTTTGACTCAAGAGTTGAAGGGATCCTTCAGATCTACGGGCAAAAGCTATTTGGACATTCTCATCCAAAATTCTTCTTCTTCCTGGGATTTCCGTGGTGTCTGGCTTTTCTCATTGGAAGCACAAAGTTCACTGTAGATTGCACAGAAGCAAGTGGATATAATAGTAAATCTGTTTCAATGGTTTGCGAGATGGAGCATGACCTTATGGAGGACATGGACATAGAAGTCCTCCATTCAATGTGGCCAGAAGATATTGGAACTGATGCTGGAAAGCAGTTTAACGTAGAGAAGCCTGGAATTGACCAAGACATGTTAGAGGAGGTCACAATAGTGGAGGAACCAACCATAGTAGATTTCAAGCGTCTCATGGAGCTCACCAACCATACAGACAGAGGCTCATCTCAGTTGACATATTTCATGAAATACTTGGAGTACAGGCAGGCTAATGCGGTGCGTCTCCTACGAGAAGAACTCGACAACCTAAGCAAACAGAGACAGGAGGTTGAGCTGAGGAAGTTAAAGATATTGGAAGAGCACCGGTTTGTGGACATAAGTTATGGGGAAGACAAACGACCAGTTTCTATATTGGATGAAGTTTATGACATATGGCAAGATATACCTCGTAGGAAAAATGACGTTGTTGTTCAGAAAAAGGGTATTGAAATAGATGCTGTGGATGATACTGTAGTGTACTGGAAGCAAAGGACACTGCATTTGGAAAAACTGTTGGAGGCAAGTATACAGAGAGAGCAGACACTAATGGAGAAGCTGGAAGAAAGCATAAAGAAGCTTGAAAAGCAGTCTTGTCCTGTAGAAGAATTGTCCCAGATTCTGAAAAGAGCAGATAATTTCTTGCATTTTATTCTGCAGAATGCACCTGTTGTCATAGGCCATCAGGACACAGAGTTGCGCTATCGCTTTATCTATAACCATTTCCCAAGCTTGCAAGAGGAGGACATCATAGGAAGAACAGATGTGGAAATTTTCACTGGGTCTGGAGTTAAGGAATCTCAAGATTTTAAGAGAGAAGTTTTGCAAAAAGGATTGCCTGCAAAAAGGGAAATTACTTTTGAGACAGAACTATTCGGGTCAAAGACATTCTTAATTTATGTAGAACCTGTCTTTAGCAAGGCAGGGGAGACAATTGGGATAAATTACATGGGAATGGATGTAACAGATCAGGTGAGAAAAAGAGAAAGAATGGCACAGATTAGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAGACTGAATTAAATAAGACCATTCACATTACAGAGGAGACTATGCGAGCAAAACAAATGCTAGCAACCATGTCCCATGAAATAAGATCTCCACTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTACTACAAAACTTGACAAAGAGCAAAGACAGCTCCTGGAAGTCATGCTTTCCTCAGGAGATTTGGTTCTTCAACTTATCAATGACATATTAGATCTTTCTAAGGTTGAGTCAGGAGCCATGAAGTTGGAAGCTACCAAATTCCGTCCAAGAGAGGTAGTAAAGCATGTGCTGCAGACCGCTGCAGCATCACTGCAGAAAATATTAACCCTACAAGGTCATGTGGCAGATGATGTACCTATTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAAACCCTCACAAATCTCATAAGCAATGCAATCAAGTTTACCCATGAAGGTAAAGTTGGCATAAATCTCTACGTTGTAGCAGAGCCCAACTTTGGAAATTCGGAAGAAGGTCTCCAAAAGATGAGTGGAGACAAGTCAAATGGATCAGTGAGTGGATTAACAGAAGAGAAATACTTCTCAGCGTCTCAAAATGGGAGTGATGAATGTAGATCTCCAGTTAAAAGCGAATGCTCAAGAACTGGGGATACAGAGGAACAACCTCATTCAACCGAAACAACAGTGTGGATACGTTGTGATGTATACGACACTGGAATTGGAATACCGGAAAAATCAATTCCTACTTTATTTAAAAGGTACATGCAAGTCAGCGCAGACCACGCTCGAAAGTATGGTGGCACAGGGCTAGGATTAGCAATATGCAAACAACTGGTCGAATTAATGGGTGGTCGTCTAACGGTGTCAAGCAAAGAACACTGTGGTTCTACATTTACGTTCATACTACCGTACAAGGTTTCTACAGCGTGTGATCATTCAGATGACCCCGACGAGCTCTCAGATATGGAGAACGACGATGCAGCGTCTGATGATGCGACACAAGGATTCTTCCAATTCCAACCACGTACATTGGGATCACTTTTCTCCTCCAACGAATCTACCAGAGCCTCAAAGTTGTCACCCCATAAACTTGGGCTCACGATCCCTCGTAACTTTAATGGGTTTTCGCAGAATTCTTATGACGTCTCTTCAAAAGGAAGAACATCAGCCGAAGATGCAATCCGAGTGACAGTAACGGACGCGCCGGAGATGTCTGAATCAGGAAATTCAATGACTCATCAGCCAGAAACAGAGAACGAAAATGTAGTTAGCAGAGACAAGCATCGTCAAGATAACACATGCACTCAACTCCCGAATGGTATTTCAAGTAGAGAAATTGGTGTGGCAACACAGCCAAGCAGAACCCAGCAATCAAGTGACACTCAAGAGAAGGATAACAGAACTTCCCAATCTGTTATTAGCAGCAGTAATAGTATATCAGAAGTGGCCAAACCCCCATTAGAGCCTAAGATCCTTCTAGTTGAAGATAACAACGTCAACGTTATGGTGGCACGCTCGATGATGAAGCAACTAGGTCACAGCATAGATGTGGTGAATAATGGAGCGGAAGCTGTGCGTGCAGTTCAGCGCTGGAGTTATGACCTCATTCTAATGGATGTGTTCATGCCCGTTATGAATGGTCTTGAAGCCACAAAATTGATTCGCTCTTTTGAGGAAACTGGCAATTGGGATGCTGCAAGAAAAGCTGGAATAGAGCCAAGCATTTCAACTTCAGATTTGCAGAAACCAGAATGTTGTCTGCCTTCCACAAAGCGAATGCCCATTATTGCAATGACGGCAAATGCTTTATCAGAGAGTGCGGAAGAGTGTTATGCAAATGGAATGGACTCATTTGTGTCTAAACCTGTGACTTTCCAGAAATTGAAGGAGTGCCTTGAGCAATTCCTACGGTGA 3453 0.4266 MDMVGRAAMTAMKLSTYIGRVLLHHNMVCFYHQLSNRPPQFGEECDFINNEGVASFSHFSWRVCNSTDDDRVLLRGNSFTKKVELKQAIAMSQGYKNVAKAFDSRVEGILQIYGQKLFGHSHPKFFFFLGFPWCLAFLIGSTKFTVDCTEASGYNSKSVSMVCEMEHDLMEDMDIEVLHSMWPEDIGTDAGKQFNVEKPGIDQDMLEEVTIVEEPTIVDFKRLMELTNHTDRGSSQLTYFMKYLEYRQANAVRLLREELDNLSKQRQEVELRKLKILEEHRFVDISYGEDKRPVSILDEVYDIWQDIPRRKNDVVVQKKGIEIDAVDDTVVYWKQRTLHLEKLLEASIQREQTLMEKLEESIKKLEKQSCPVEELSQILKRADNFLHFILQNAPVVIGHQDTELRYRFIYNHFPSLQEEDIIGRTDVEIFTGSGVKESQDFKREVLQKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAQIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLEVMLSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKILTLQGHVADDVPIEVIGDVLRIRQTLTNLISNAIKFTHEGKVGINLYVVAEPNFGNSEEGLQKMSGDKSNGSVSGLTEEKYFSASQNGSDECRSPVKSECSRTGDTEEQPHSTETTVWIRCDVYDTGIGIPEKSIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTFILPYKVSTACDHSDDPDELSDMENDDAASDDATQGFFQFQPRTLGSLFSSNESTRASKLSPHKLGLTIPRNFNGFSQNSYDVSSKGRTSAEDAIRVTVTDAPEMSESGNSMTHQPETENENVVSRDKHRQDNTCTQLPNGISSREIGVATQPSRTQQSSDTQEKDNRTSQSVISSSNSISEVAKPPLEPKILLVEDNNVNVMVARSMMKQLGHSIDVVNNGAEAVRAVQRWSYDLILMDVFMPVMNGLEATKLIRSFEETGNWDAARKAGIEPSISTSDLQKPECCLPSTKRMPIIAMTANALSESAEECYANGMDSFVSKPVTFQKLKECLEQFLR 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0718 1150 MobiDBLite consensus disorder prediction 720 734 - -
Lele26g0718 1150 Gene3D - 1000 1150 - -
Lele26g0718 1150 Gene3D - 519 596 - -
Lele26g0718 1150 Pfam Response regulator receiver domain 1004 1071 IPR001789 GO:0000160
Lele26g0718 1150 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 642 817 IPR003594 -
Lele26g0718 1150 ProSiteProfiles Response regulatory domain profile. 1003 1149 IPR001789 GO:0000160
Lele26g0718 1150 SUPERFAMILY CheY-like 1002 1150 IPR011006 -
Lele26g0718 1150 PRINTS Bacterial sensor protein C-terminal signature 803 816 IPR004358 GO:0016310|GO:0016772
Lele26g0718 1150 PRINTS Bacterial sensor protein C-terminal signature 744 758 IPR004358 GO:0016310|GO:0016772
Lele26g0718 1150 PRINTS Bacterial sensor protein C-terminal signature 779 797 IPR004358 GO:0016310|GO:0016772
Lele26g0718 1150 Coils Coil 341 368 - -
Lele26g0718 1150 MobiDBLite consensus disorder prediction 946 994 - -
Lele26g0718 1150 CDD HATPase_EvgS-ArcB-TorS-like 647 816 - -
Lele26g0718 1150 Coils Coil 252 279 - -
Lele26g0718 1150 FunFam Histidine kinase 5 996 1150 - -
Lele26g0718 1150 Gene3D PAS domain 373 508 - -
Lele26g0718 1150 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 585 819 IPR036890 -
Lele26g0718 1150 SMART REC_2 1002 1145 IPR001789 GO:0000160
Lele26g0718 1150 CDD HisKA 530 592 IPR003661 GO:0000155|GO:0007165
Lele26g0718 1150 Gene3D - 597 823 IPR036890 -
Lele26g0718 1150 FunFam Histidine kinase 5 373 508 - -
Lele26g0718 1150 MobiDBLite consensus disorder prediction 707 737 - -
Lele26g0718 1150 MobiDBLite consensus disorder prediction 883 899 - -
Lele26g0718 1150 MobiDBLite consensus disorder prediction 915 931 - -
Lele26g0718 1150 Pfam His Kinase A (phospho-acceptor) domain 533 596 IPR003661 GO:0000155|GO:0007165
Lele26g0718 1150 SMART HKATPase_4 642 819 IPR003594 -
Lele26g0718 1150 CDD REC_hyHK_CKI1_RcsC-like 1004 1145 - -
Lele26g0718 1150 ProSiteProfiles Histidine kinase domain profile. 538 819 IPR005467 -
Lele26g0718 1150 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 171 1149 - -
Lele26g0718 1150 MobiDBLite consensus disorder prediction 867 994 - -
Lele26g0718 1150 FunFam Putative histidine kinase 5 519 596 - -
Lele26g0718 1150 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 530 596 IPR036097 GO:0000155|GO:0007165
Lele26g0718 1150 SMART HisKA_10 531 596 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0718 Lele-ChrLele26 4547315 4560022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0718 161 1149 Histidine Kinase Gene Family AT5G10720 58.700 0.0 1119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele26g0718 HATPase_c 1.3e-26 CL0025