Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0714 ATGGCACAGAGAAACGAAGGCGTACCAGTAAAAGTAGGAATCATACTCGATCTTTCTTCTCCAGCTACAAAGATGGGCTTGAGCTGTATCAACATGTCCCTCTCTAACTTTTACGTCTCTCATTCTCATTACAGAATCAGGCTCGTCTTCATCGTCAGGGACTCCCACTCACACGTTGTTTCTGCAGCTTCTCAAGGCGTGCGACTCTTCACCATTGCAAAACAGATTGGAATGATGAGCAAGGGCTTCGTTTGGATCGTAACAGATGGTTTGGCTAATGGATTAAGCTCTTTGAATTCCTCAGTCATAGAATCAATGGAAGGAGTTTTTGGCGTGAGGACTTATATTCCCAAAACAGAGAGGTTCAATGACTTTAAAGTTCGATGGAAAAGAAGATTCATACAAGACTATCCTGCCCTTGTTGATACTGATTTGAATGTTTTTGGTTTATGGGCTTACGATGCTGCCACAGCATTAGCTATGGCTATTGAGAAGGTTGATATCAACAATCTTGGATTTTCTATGAGCAATGCTTCGTCCAATTCAACTGATTTGGAAAGGATTGGAGTTTCAAGAAGTGGTGAAAAGCTGCGTGAAGCCTTATCAAACATTACATTTACAGGCCCCAGTGGAGAATTCAGCATTGTTAACAGGCAATTGCAAGCTTCGATGTTTGAGATATTGAATGTGATTGGGAATGGGGGAAGAACGATTGGGTTTTGGACACCACAAAACGGAATAGTCAGAAATCTAGACTCGACTAACAACAACAAAATGTATTATTCTACATCAAGTAAGGATCTAGGTTCAATTATATGGCCAGGGGCACGGATTCTGTTCCAAAGGGATGGCAAATTCCCACGAATGCGAGGAAAGGTCACTGGATTTTGCATTGAAGTGTTCAAAGCAGTTTTGGAAGTTCTCCCTTATGGCTTACCCTATGAGTTCATCCCTTGTGCCAAACCAAATGGCGACAGTGCAGGATCATACAATAATCTCATCAGCCAAGAAGAAGAATGCATGGGCCTTCTTAAAGCCATTGACTTGAACACCGAATCAACGAACATTTCAGAGGGCCTCCATCGCACCAGATTGGGACAAGCTTATGGACAAAAAGTCGTGAGCAACTTGGGTAGATTTGTGGTGATTATATGGGTTTTTGTGGTTCTAATTCTGGTTCAAAGCTACACTGTTAGTCTGACGGCACTTTTGACGGTTGAGCAGCTCAACCCAAATGGAACTGACATTAATTTACTGATAAAGAAGAGAATAAATGTCGGTTACAAGAAAGGTTCGTTTGTACGTGAAATCTTGAAGGAAATGGGTTTCCTTGATTACCAAGTTAAAACATATAAATCCACAGAGGAATGCAACGATCTGTTTGCAAGAGGAAGTGAGAATGGCGGCATTGCAGCTGCATTTGATAAAGTGCCATACGTGGCGAAATTCTTTCTTCGAAGTTATTGTTCTAAGTATGCCATGGTTGAGCCAACTTTCAAAACTGGCGGCTTTGGATTTGTGTTCCCTAAAGGTTCTCCTCTTGTGGCTGACATATCAAGGGCAATCCTGAATGTTACACAAGGAGATAAAATGAAGGTGATAGAGAATGCTAGGTTCAGAAAAAACAAGTGCCCAGGTTCTGATACCTCAATTTCATCAAACAGCTTAGAACTTGAAAGCTTCTGGGGACTATTTCTCATTGTAGGGGTTGCTTCTGCTCTAGCTCTGTTGATTGTCTTCTTCGTTAACTTCCTATATCAGCACAGACAAATCTGGTTACAGTGTGATCCCAATACCTCAAAGTGGAGAGGAATTGGGAAGTTGATAGAGAAGTTTGACCAGAAGGACCTGAGTTCTCACACCTTCAGAAAAAGGGAAATGCAAAATAATAAGAGAGAATTATAG 1905 0.4147 MAQRNEGVPVKVGIILDLSSPATKMGLSCINMSLSNFYVSHSHYRIRLVFIVRDSHSHVVSAASQGVRLFTIAKQIGMMSKGFVWIVTDGLANGLSSLNSSVIESMEGVFGVRTYIPKTERFNDFKVRWKRRFIQDYPALVDTDLNVFGLWAYDAATALAMAIEKVDINNLGFSMSNASSNSTDLERIGVSRSGEKLREALSNITFTGPSGEFSIVNRQLQASMFEILNVIGNGGRTIGFWTPQNGIVRNLDSTNNNKMYYSTSSKDLGSIIWPGARILFQRDGKFPRMRGKVTGFCIEVFKAVLEVLPYGLPYEFIPCAKPNGDSAGSYNNLISQEEECMGLLKAIDLNTESTNISEGLHRTRLGQAYGQKVVSNLGRFVVIIWVFVVLILVQSYTVSLTALLTVEQLNPNGTDINLLIKKRINVGYKKGSFVREILKEMGFLDYQVKTYKSTEECNDLFARGSENGGIAAAFDKVPYVAKFFLRSYCSKYAMVEPTFKTGGFGFVFPKGSPLVADISRAILNVTQGDKMKVIENARFRKNKCPGSDTSISSNSLELESFWGLFLIVGVASALALLIVFFVNFLYQHRQIWLQCDPNTSKWRGIGKLIEKFDQKDLSSHTFRKREMQNNKREL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0714 634 Pfam Ligand-gated ion channel 367 571 IPR001320 GO:0015276|GO:0016020
Lele26g0714 634 Gene3D - 114 222 - -
Lele26g0714 634 Gene3D - 247 441 - -
Lele26g0714 634 SUPERFAMILY Periplasmic binding protein-like II 291 536 - -
Lele26g0714 634 Pfam Receptor family ligand binding region 64 232 IPR001828 -
Lele26g0714 634 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 373 617 - -
Lele26g0714 634 Gene3D - 30 246 - -
Lele26g0714 634 SMART GluR_14 283 541 IPR001320 GO:0015276|GO:0016020
Lele26g0714 634 Coils Coil 617 634 - -
Lele26g0714 634 Gene3D - 486 546 - -
Lele26g0714 634 SUPERFAMILY Periplasmic binding protein-like I 64 242 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0714 Lele-ChrLele26 4531078 4534097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0714 68 625 Ion Channels AT4G31710 34.361 8.06e-99 320