Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0697 ATGGCTGGTTCTTCAAGAGCTGCTTCGGTTTCCCTTTACTTCGTATTCCTTCTCTTTAGATTCTCTGCGGCTAAGGAAGTCTTGGTCGGAGGCAAGACCGATGCGTGGAAGATACCGTCCTCTGAATCAGACTCCCTCAACAAATGGGCCGAACGGTCTCGTTTCCAAGTCGGCGATTATCTCGTCTGGAAATACGATAGTGGAAAAGACTCGGTCTTGCAAGTAAGCAGGGAAGATTACGGTGACTGCAGCACCGCCAATCCCATCAAAGTGTACAATGATGGAAACACTAAGGTGAAGCTCGACCGTCCTGGGCCATTCTACTTCATTAGTGGGGCCAAGGGACACTGTGAGGAAGGCCAGAAGCTCATTGTGGTGGTTCTCACTCCAAAGCGCAGGTTCACCGGTATTTCTCCGGCACCTGCCCCGGCTCCGATGGAGTTTGAAGGCCCAGCTGTGGCTCTCAGTAGCAGTGCCCCTGCTTTAAAAGGTGGCCTTGCAGCAGTTCTGGGATTTCTGACCATTTGGGCTTTCTGA 537 0.5196 MAGSSRAASVSLYFVFLLFRFSAAKEVLVGGKTDAWKIPSSESDSLNKWAERSRFQVGDYLVWKYDSGKDSVLQVSREDYGDCSTANPIKVYNDGNTKVKLDRPGPFYFISGAKGHCEEGQKLIVVVLTPKRRFTGISPAPAPAPMEFEGPAVALSSSAPALKGGLAAVLGFLTIWAF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0697 178 PANTHER BLUE COPPER PROTEIN 26 140 IPR039391 GO:0009055
Lele26g0697 178 FunFam Early nodulin-like protein 1 24 132 - -
Lele26g0697 178 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Lele26g0697 178 Gene3D - 23 131 IPR008972 -
Lele26g0697 178 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Lele26g0697 178 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Lele26g0697 178 CDD OsENODL1_like 25 128 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0697 Lele-ChrLele26 4444957 4445588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0697 1 178 Phytocyanin Superfamily AT4G31840 51.955 1.07e-61 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0695 01 4080896 4088243 Lele26g0697 26 4444957 4445588 CCT
Lele02g0681 02 4091531 4100425 Lele26g0697 26 4444957 4445588 CCT
Lele03g0692 03 4089708 4098711 Lele26g0697 26 4444957 4445588 CCT
Lele04g0697 04 4229096 4239390 Lele26g0697 26 4444957 4445588 CCT
Lele26g0697 26 4444957 4445588 Lele27g1400 27 20313998 20314628 hybridization
Lele26g0697 26 4444957 4445588 Lele28g0680 28 4357723 4359576 hybridization