Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0688 ATGCTCGTTTGCATGTATCTACATCCTGTCATATTACTTGGTAATAAAGATCTAGCATTGCCTAATTTGTATGTGGTTTTGACTTTTGATTATTTTGTTGTGCATGCTGTAGTCTTTGATTACTGCTTTAGCACAGATGTTTTGGAGGAAGAAGAATATAAAGTTTATATATTGGGAATTATTGGGCTGCTTCATGATCACTTCCCTGAGTCTTCATTTATGGTGTTTAACTTTCGGGAGGGCGATCATCAAAGCCAGATAGCTAGCATTTTGTGTGACTATGACATGACTATAATGGAATATCCTCGACAGTATGAAGGTTGTCCGATACTCACCATGGAGACGATCCACCACTTCTTAAGATCATGTGAAAGCTGGTTTCAACTTGGGCAAAATAATATTATCTTGATGCATTGTGAACGAGGTGGGTGGCCAGTTTTAGCATTCATGCTGGCTGCTCTCTTGATTTATAGGAAGCAGTATACAGGGGAGCAAAGAACCTTAGACATGATATATAAGCAAGCGCCTCGCGAACTTTTGCAGTTAATGTCCCCATTGAATCCTTTACCTTCGCAATTGAGGTATCTTCAGTATGTATCAAGAAGAAATGTAGGTGCACAATGGCCTCCTCTAGATAGAGCACTTACATTGGATTGTGTTATTATGAGATTAATTCCTAATATGGATGGAGAGGGAGGTTGCCGTCCTATATTTAGAATATATGGACAGGACCCTTTTATGGCTGCTGATCGGACTCCCAAAGTTCTGTTTTCGACTCCAAAACAGAGCAAAGTTGTCAGGCATTATAAGCAGGAATGTCAACTTGTAAAGATTGACATACATTGTCATGTTCAAGGCGATGTTGTTCTTGAGTGTATTAGTCTGGATAGTGATTTGGAACGTGAGGAGATGATGTTTCGTGTCATGTTTAATACAGCATTCATCCGATCGAATATTTTGATACTTAACCGTGATGAAATTGACACATTATGGAATGGTGAAGACCAATTTCCGAAAGATTTTAGAGTAGAGATTCTCCTCTCAGACATGGATGCTGCTTCTTCTGTTATTTCAATTGATATGCCTCGGATTGAGGACAAAGAAGGCCTTCCTATTGAAGCATTTGCCAAAGTTCAAGAATTTTTCAGCAATGTTGATTGGTTAGACTCAAAAACAGAGGTAGTGAATGTGCTCCAGCAGATCACAGCATCAAATAAGCTCCAGGAAATATTGGACAGTGGAGTTTCTGCAACACCAAGCAACTTGCTAAAGGATTCATTGTCTGGAATATCTAAATTTGATCCAATAACACTGCCAGAAAATGATAACAAGGTTACTACATCCTCAGGTCAGGGGAAGCAATTTATTTCCCCATTAGAACTCTCAACTGATTCAAATCTTACTAAAAAGATTATCTCATTAGGATCGAAGGCACCACTGGAAAATGATACTGAGAATCTTACATTAATGGCTCAAGGGAATAGATCTCTTGCCTTAGAAGTGGCCAAACAATCTATTCTCTCACACAAGCCTTCTGATGATGCTAATTCTATTAAAAAGAGGATAGAAACATCAGAAACAATGGCATTGTCCAAAGACAATGACAGGAGTCTCACACTGACACATCGGACTAAAGAATCTATTCCCTCATATGAGCCTTCTGCTGATCCTAATTCTCTCAAAAGGAGGATTGAACCTCAACATTTACAGGTTGCTCTTAAGTTGCCCACGCAATCCAAAATCATTTCTCCACGGGTGTGTCAGGCTTCTCAATCTGCTCCAGTTTTATATTGCAGTTCTTTACAAGGTTCACCTGTACCTATATCAAGATATCCTAGTGCACCATCAGCCCTTGGAATAACAGCTTTGCTGCAGGATCGTGTTGAAGGGGATATCAATAAAGTCAATCATGGAGTTACTATGGCCCCCTCTTCTTCTGCATTGTCTCCTTCTGTCTTAGAGGTGCCAAAATCTGTAGACATAAGTCCTACAAGTGTTCCTCCAGTATCATCTTCAACATTGCTGCGATCTTTATCACTGAAATCTTTGATGGCTGTTCCTGCAGTCACACATAACACTGTTGTGCCCCTTGGTCATGCTGTTTCTTCTCCTTCTCCTCCTAAACCGCAGCCTACTTCAGAAATGATGCAACCTAGTGTCACCCAGCACCCAGAAAATATGGCACCTGATAAAACTAAAAAAGCATTGGTTTCTCCTCCTACTCCTACACCTCAACCTCAATCTCAGCCTACGTCAGAATTGACGCAACCTGCTGTCACCCAACACCCTGAGAATATAGTGCATGACAAAGGTGAAAGGTCATCAGTTTCTCCTCATCAACCTCAGCTTTCTTCAGAATTGATGCAACCTATTGTCTACCAGCAGCCTGAAAATACAACGCATGATAAAAGTAAAAAGTCATTAGTTTCTCCTCCTGCACCTCCGCCCCCACCTCCTCACTCAACTGTAGCTCCTCTCCTATCACCTTCGTCCACAAAGAGTTCATTGCCAACCCTTCCTCCGCCCACTCCACCCCCTCCACCACCTCCCACTGTAAAAAGTTCATTTGCATCTCCCCTTCTCCATCCCTCACTTCCTCACCCAACAACTGTTCCTCTTCCCGCATCTTCCACGAATAGCTCATTTTCACCCCCTCCTTCACCAGCTCCAGCCCCTCCACATTCCACTTCAGAATATTCACTCAAAGCTCTCCCTCCTCCACCTCCACCTCCACCTCCACCTCCATCTTCAACTTCTAAGACCTTTTCAATTCCTCCCCCTCCACTCTGTGGGATTCCTTCTTCAGCTGCCCATTTTAACCCTTCTTCACTGAATATGAACAATTCTGCTGCTATCTCTGGCCCTCCACCCCCACCCCCACCTCCTGGGTATTCTGGAACCATGTCTGGTCCTATTCTTACATCAACAGTGCCACCCCCACCCCCACCACCTACTTCTCCTACCACAACTTTGACAAAGAACTCTGCTACCGCTCCACCTATACCTCCTCCCTCTTCTGCTAATGGGACTCTGCACCCTGGCACTGGTAATGGACATGTACCTCCAGTTCCTGGACCGCCTAGTTTTCCATTTGGTGGTGCAAAGGGACGTGGCTTGTCACGACTAAATGTAAAAACTCAAACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGTCATGCATGGAAGTTTATGGGCTGAGACACAGAAGCCTGAGGAAGCTTCTAAGGCTCCAGAATTTGACATGTCAGAACTTGAGAGTCTTTTCTCTGCAGCTACTCCAAATTCTGATCGTGGAGGCAAAGGAGGACAATCCAATCATCGTGGCTCAGGGACTAAAACTGAGAAAGTTCAACTGATTGAGCTAAGGCGGGCATATAATTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCAGATTTAATGAGCTCTGTGCTTGCTTTGGATGATTCAGCATTAGATGTCGATCAGAACTACAGTGGAGACAATGACAACTTAGGAAGGTGTGAACAGTTCTTCTTGGAATTGATGAATGTTCCAAGAGTTGAAAGCAAGTTAAGAGTATTCTCTTTTAAGATACAATTCCAGACTCAGATAAGGAATTCAGTCAAGTTGAAAAGAATTATGCAGACCATTCTTTCTCTTGGTAATGCTTTGAACCACGGAACTGCAAGAGGTGCTGCTATTGGGTTTCGATTGGACAGTCTCCTTAAGCTCACCGATACGCGAGCCAGGAACAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTCTCCAAAGACCTAGAGAGCTTGGAGGCTTCAACGAAGATACAATTGAAATATTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTTGAGAAAGTAGTTCAGGAATTGACTGTGTCAGAGAATGATGGGCCTGTATCAGAAAATTTCTGCAAGATTTTAAAGGAATTTCTTAGCGATGCTGAAGCCGAAGGTAGAAACGCTGATGCATTAGCTCAATACTTTGGAGAGGATCCTGCACGTTGCCCATTTGAACAAGTTGTATCCACCCTACTCAACTTTGTAAGGATGTTTGTACGAGCTCATGAAGATAACTGCAAGCAGCTCGAATTCGAGAAAAAGAAAGCAATGAAGGAAGCAGAAAATGAGAAGTTGAAGTTAACTCCTAAGGAGTCTGAGCAAATTATACGAACCCCCATTGAGAGTGGCAAAATTAAGTGA 4263 0.4248 MLVCMYLHPVILLGNKDLALPNLYVVLTFDYFVVHAVVFDYCFSTDVLEEEEYKVYILGIIGLLHDHFPESSFMVFNFREGDHQSQIASILCDYDMTIMEYPRQYEGCPILTMETIHHFLRSCESWFQLGQNNIILMHCERGGWPVLAFMLAALLIYRKQYTGEQRTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVGAQWPPLDRALTLDCVIMRLIPNMDGEGGCRPIFRIYGQDPFMAADRTPKVLFSTPKQSKVVRHYKQECQLVKIDIHCHVQGDVVLECISLDSDLEREEMMFRVMFNTAFIRSNILILNRDEIDTLWNGEDQFPKDFRVEILLSDMDAASSVISIDMPRIEDKEGLPIEAFAKVQEFFSNVDWLDSKTEVVNVLQQITASNKLQEILDSGVSATPSNLLKDSLSGISKFDPITLPENDNKVTTSSGQGKQFISPLELSTDSNLTKKIISLGSKAPLENDTENLTLMAQGNRSLALEVAKQSILSHKPSDDANSIKKRIETSETMALSKDNDRSLTLTHRTKESIPSYEPSADPNSLKRRIEPQHLQVALKLPTQSKIISPRVCQASQSAPVLYCSSLQGSPVPISRYPSAPSALGITALLQDRVEGDINKVNHGVTMAPSSSALSPSVLEVPKSVDISPTSVPPVSSSTLLRSLSLKSLMAVPAVTHNTVVPLGHAVSSPSPPKPQPTSEMMQPSVTQHPENMAPDKTKKALVSPPTPTPQPQSQPTSELTQPAVTQHPENIVHDKGERSSVSPHQPQLSSELMQPIVYQQPENTTHDKSKKSLVSPPAPPPPPPHSTVAPLLSPSSTKSSLPTLPPPTPPPPPPPTVKSSFASPLLHPSLPHPTTVPLPASSTNSSFSPPPSPAPAPPHSTSEYSLKALPPPPPPPPPPPSSTSKTFSIPPPPLCGIPSSAAHFNPSSLNMNNSAAISGPPPPPPPPGYSGTMSGPILTSTVPPPPPPPTSPTTTLTKNSATAPPIPPPSSANGTLHPGTGNGHVPPVPGPPSFPFGGAKGRGLSRLNVKTQTKRSNLKPYHWLKLTRVMHGSLWAETQKPEEASKAPEFDMSELESLFSAATPNSDRGGKGGQSNHRGSGTKTEKVQLIELRRAYNCEIMLTKVKIPLPDLMSSVLALDDSALDVDQNYSGDNDNLGRCEQFFLELMNVPRVESKLRVFSFKIQFQTQIRNSVKLKRIMQTILSLGNALNHGTARGAAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLESLEASTKIQLKYLAEEMQAISKGLEKVVQELTVSENDGPVSENFCKILKEFLSDAEAEGRNADALAQYFGEDPARCPFEQVVSTLLNFVRMFVRAHEDNCKQLEFEKKKAMKEAENEKLKLTPKESEQIIRTPIESGKIK 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0688 1420 MobiDBLite consensus disorder prediction 1396 1420 - -
Lele26g0688 1420 Gene3D - 209 353 - -
Lele26g0688 1420 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1204 1398 IPR015425 -
Lele26g0688 1420 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 75 200 IPR029021 -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 697 758 - -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 797 1048 - -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 1096 1118 - -
Lele26g0688 1420 Gene3D Protein tyrosine phosphatase superfamily 25 204 IPR029021 -
Lele26g0688 1420 Pfam C2 domain of PTEN tumour-suppressor protein 213 348 IPR014020 -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 952 966 - -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 879 893 - -
Lele26g0688 1420 PANTHER FORMIN-J 37 750 - -
Lele26g0688 1420 PRINTS Proline rich extensin signature 738 750 - -
Lele26g0688 1420 PRINTS Proline rich extensin signature 868 893 - -
Lele26g0688 1420 PRINTS Proline rich extensin signature 846 863 - -
Lele26g0688 1420 PRINTS Proline rich extensin signature 807 828 - -
Lele26g0688 1420 PRINTS Proline rich extensin signature 829 845 - -
Lele26g0688 1420 SMART PTEN_C2_2 210 349 IPR014020 -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 809 824 - -
Lele26g0688 1420 Pfam Formin Homology 2 Domain 1045 1163 IPR015425 -
Lele26g0688 1420 Pfam Formin Homology 2 Domain 1163 1372 IPR015425 -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 1096 1119 - -
Lele26g0688 1420 SMART it6_source 805 1418 IPR015425 -
Lele26g0688 1420 ProSiteProfiles C2 tensin-type domain profile. 212 350 IPR014020 -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 902 932 - -
Lele26g0688 1420 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 214 350 IPR035892 -
Lele26g0688 1420 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1056 1390 - -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 835 854 - -
Lele26g0688 1420 Gene3D Formin, FH2 domain 1062 1409 IPR042201 -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 936 951 - -
Lele26g0688 1420 MobiDBLite consensus disorder prediction 974 988 - -
Lele26g0688 1420 Coils Coil 1373 1400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0688 Lele-ChrLele26 4399727 4406749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0688 543 626 FH2 protein (formin) Gene Family AT2G25050 41.176 3.05e-11 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0688 26 4399727 4406749 Lele27g1407 27 20357325 20364950 hybridization
Lele26g0688 26 4399727 4406749 Lele28g0672 28 4312294 4320021 hybridization