Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0687 ATGGATGGAAAGGGAGAAACGCTTCAATCGGAGTTGAAGCGTGTGAGAGATGAGAATAGCACTTTAAAATTGATGCTTCAAGTTCTGAACAGCAAATACCAGAAGGTTCTGTCTCAACTTGAAGAAATAAGAGGATTGGACTACTCGAATCAAATTGCGTCAGTTTCGTCTGATTACGATACGATGAACAATAAGAGACCAAGAATTGAATTACCCATAGCTCATAAGCCACTGCAGATCTTTGCCAGAACCCATCCCAAGGATAACAGTATGATAGTAAGAGATGGATATCAGTGGAGGAAGTATGGCCAGAAAGTTACAAAAGACAATCCTTCGCCTCGAGCTTACTTCAGATGTTCCATGTCTCCAAACTGCCCAGTCAAAAAGAAGGTACAAAGATGTGTCCAAGACAGGTCAATCCTAGTGGCAACTTATGAAGGAGAACACAATCATGGGGTTGTTGATCCTAACACTCCCAAAGGCTCAATTTCTGTCAACAAAGAAGCGACCAACGTTAATGGGGTCGGGCTTCCTAGTTGGATTCAGAAAGATAGAAGACAAAATGAGGATCTGAGCAACATCAGAATTGAACAATTTGTAGGTTCTCTCATCAAAGATCCCGACTTCACCGTATCGTTAGCCGAAGCAGTTGCACGCTCCATCACTACCCAACAACAACGTAAGCAACAAGACCTTGACCTTAATTTGAGTCTTGCTGAAGTGTAA 726 0.4229 MDGKGETLQSELKRVRDENSTLKLMLQVLNSKYQKVLSQLEEIRGLDYSNQIASVSSDYDTMNNKRPRIELPIAHKPLQIFARTHPKDNSMIVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRCVQDRSILVATYEGEHNHGVVDPNTPKGSISVNKEATNVNGVGLPSWIQKDRRQNEDLSNIRIEQFVGSLIKDPDFTVSLAEAVARSITTQQQRKQQDLDLNLSLAEV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0687 241 Coils Coil 12 32 - -
Lele26g0687 241 Pfam WRKY DNA -binding domain 95 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g0687 241 SUPERFAMILY WRKY DNA-binding domain 89 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g0687 241 Gene3D WRKY domain 81 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele26g0687 241 ProSiteProfiles WRKY domain profile. 88 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele26g0687 241 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 163 IPR044810 GO:0003700
Lele26g0687 241 SMART WRKY_cls 93 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0687 Lele-ChrLele26 4397674 4398963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0687 2 217 WRKY Transcription Factor Family AT1G80840 36.364 8.19e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele26g0687 WRKY 9.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0687 26 4397674 4398963 Lele01g0681 01 4007951 4010680 CCT
Lele26g0687 26 4397674 4398963 Lele02g0669 02 4022882 4025389 CCT
Lele26g0687 26 4397674 4398963 Lele03g0676 03 4005715 4013557 CCT
Lele26g0687 26 4397674 4398963 Lele04g0683 04 4160702 4162016 CCT
Lele26g0687 26 4397674 4398963 Lele27g1409 27 20371672 20373155 hybridization
Lele26g0687 26 4397674 4398963 Lele28g0671 28 4310155 4311339 hybridization