Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0682 ATGGCAAAGTATCACCGGAACAACATCGGATCTCTGGTTCTCGACCATCAAGATCCTACCAGGAATGCAACAGTCGGCGCCCACTGCCGCATATGGAATGCCTTGTCCACTTCAACAATACGCCGCATCATTTTTGACGCTGTCAGCTGTGGCGGAGGCTCTCGGCATCACCGCCACCACCGTAATGACTTTGTCTCCATACCTTCGCCGAGTTCATCAGACTCCGGGAACTCTAAGGACAAGTTGCAAGAACAGAGACAGTGTGCTTCCAAGTCTCAGCCGAAACCAAATGCGAAGTCGGAGAAACTATCGGATCTTCTGAATATAGCGGAGTCTGAAATTGACGCCCAAACGAAGAAAGAAGAGGCATTGCAGGAGTTGAAGAGAACTGTGAAGGAGTTACAGGTTGAGGATTTGACAAAGCGGCAAATGGCTGCGGCTAGCGTGAGATTGCTCGCAAAGGAAGGCTTGGAACTCAGAGGGACACTTGCAATGCTTGGAGCGATTCCTCCCCTGGTTGGAATGCTTGATTTGGAAGACGTCAATTCTCAGATCTCTTCGCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAGGCAGCCATTGTCAAAGTTGGTGCTGTTCACAAAATGCTAAAGCTCATTGAATCACCAACTGATCCGGATTCATCCGTCTCTGAAGCAGTTGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATTCGAATAAACCAATAATTGGATCGTCGGGTGCGATTCCTTTTCTGTTTAGAACCCTGGAAAATTCACATGAAAAAACTAGCCCCCAGGCTAAGCAAGATGCTCTCCGAGCACTTTACAATCTATCAATCTTCCCAGCCAACATCTCATTCATATTGGAAACGGATTTGGTTCCGTTTCTGATAAACGCAATAGGAGACATGGAACTAAGTGAAAGAATTCTCGCAATCCTAAGCAATTTGTTACCAACCCCTGAGGGCCGAAAAGCTATAAGTGCCGTGCGAGATGGATTCCCCATTCTGGTTGATGTATTGAATTGGACAGATTCACCTGGATGCCAGGAAAAAGCATCTTATATCTTGATGATTATGGCACACAAAGCCTACGGTGACAGGCAGGCCATGATTGAGGCTGGGATTGCCTCGTCATTGCTCGAGTTGATGCTTCTGGGTACTGCGTTGGCACAGAAAAGGGCCTCGAGAATATTGGAATGCTTGAGAATAGACAAAGGGAAGCAGGTATCTAGGAGTTCTGGCGGAAACTTCAGTTCAACTGTATCTGCTCCCATTTGTGGCTCTTCGTCATCTTGTACGAAGCCAGATGGAAGTGGAGAGGAGTGTTTGGAAGAGGAGGAAGATATGATGAGTGACGAAAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTGAAAAGGGCCAATTTGCCTCAAGATTTCGTTCCATCCGACCATTTTAAGGCACTCACTTCAGGATCGACTTCAAAAAGCCTGCCATTTTGA 1530 0.466 MAKYHRNNIGSLVLDHQDPTRNATVGAHCRIWNALSTSTIRRIIFDAVSCGGGSRHHRHHRNDFVSIPSPSSSDSGNSKDKLQEQRQCASKSQPKPNAKSEKLSDLLNIAESEIDAQTKKEEALQELKRTVKELQVEDLTKRQMAAASVRLLAKEGLELRGTLAMLGAIPPLVGMLDLEDVNSQISSLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPTDPDSSVSEAVVANFLGLSALDSNKPIIGSSGAIPFLFRTLENSHEKTSPQAKQDALRALYNLSIFPANISFILETDLVPFLINAIGDMELSERILAILSNLLPTPEGRKAISAVRDGFPILVDVLNWTDSPGCQEKASYILMIMAHKAYGDRQAMIEAGIASSLLELMLLGTALAQKRASRILECLRIDKGKQVSRSSGGNFSSTVSAPICGSSSSCTKPDGSGEECLEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSDHFKALTSGSTSKSLPF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0682 509 Coils Coil 100 137 - -
Lele26g0682 509 Gene3D - 98 268 IPR011989 -
Lele26g0682 509 SMART arm_5 329 368 IPR000225 GO:0005515
Lele26g0682 509 SMART arm_5 198 241 IPR000225 GO:0005515
Lele26g0682 509 SMART arm_5 156 196 IPR000225 GO:0005515
Lele26g0682 509 SMART arm_5 242 286 IPR000225 GO:0005515
Lele26g0682 509 SMART arm_5 287 325 IPR000225 GO:0005515
Lele26g0682 509 SUPERFAMILY ARM repeat 131 411 IPR016024 -
Lele26g0682 509 Coils Coil 450 470 - -
Lele26g0682 509 MobiDBLite consensus disorder prediction 51 103 - -
Lele26g0682 509 Gene3D - 269 422 IPR011989 -
Lele26g0682 509 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0682 Lele-ChrLele26 4349839 4351835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0682 122 418 U-box Gene Family AT2G23140 32.550 2.61e-31 126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0682 26 4349839 4351835 Lele02g0663 02 3981105 3983011 CCT
Lele26g0682 26 4349839 4351835 Lele03g0673 03 3968328 3970189 CCT
Lele01g0683 01 4016009 4024576 Lele26g0682 26 4349839 4351835 CCT
Lele02g0671 02 4029613 4033130 Lele26g0682 26 4349839 4351835 CCT
Lele03g0678 03 4023655 4027156 Lele26g0682 26 4349839 4351835 CCT
Lele04g0685 04 4167101 4170369 Lele26g0682 26 4349839 4351835 CCT
Lele26g0682 26 4349839 4351835 Lele27g1415 27 20425467 20427467 hybridization
Lele26g0682 26 4349839 4351835 Lele28g0666 28 4258456 4263795 hybridization