Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0678 ATGGAGAGCGTGAAGCAGAAATGCAAGAGGGTTTGGGGACGATGCAGAAGCTACAACATAATCTGGAAGTTTCGAGAATCATTTGGAAAGAGTAAGAAGGATGAGAAGAAGCAGGTGGTGGCTCCGGAGGGATTTTTGTGGGTGTACGTGGGACCCCAGAGAGAGAGATTCCTGGTGAAGATAGAGCTGGCGAATCACCCAATGTTCAAGGAGCTCCTAGATGACGCAGAGAGTGAGTATGGATACAGAAACGACGGTCCCATTTGGCTTCCTTGTGATGTCAATATATTCTGCGAAGCTGTGGCGGAGATGGAGATAGAGATCGAAGAAGATAAAATGAGTTCTGCATCATCATGGGCTTGCTCCTTTCATCACAAGAGTTATCCTAACTCACTTATGCACAGTCCTCTTTCCTCTTTTTCTAACCATTTTGGTACTACAGATTACGAGCTTTTAAGTCCCTGCAGATTGTATGTTTAG 480 0.4521 MESVKQKCKRVWGRCRSYNIIWKFRESFGKSKKDEKKQVVAPEGFLWVYVGPQRERFLVKIELANHPMFKELLDDAESEYGYRNDGPIWLPCDVNIFCEAVAEMEIEIEEDKMSSASSWACSFHHKSYPNSLMHSPLSSFSNHFGTTDYELLSPCRLYV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0678 159 Pfam Auxin responsive protein 29 101 IPR003676 GO:0009733
Lele26g0678 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0678 Lele-ChrLele26 4310623 4311102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0678 22 102 Calmodulin-binding Proteins AT4G34750 39.506 1.30e-16 70.5