Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0670 ATGAACACCAAGCTTCTTCCTTTTCTGCTTCTCCTTCTCCTTCTTCTTCACGAACCCATTTCTGTTCATGCTGCAGCAGACCCTCCTGCTCCTGCAAGTGCTCTCCAGACTAATTCCTCAATTCCTGCTTCAATGGCTGCTTCCTCCCCAGGAATTCAGGTGGAGAACAAAGAACACCAAATGGATTTACACAAGAAGATGGTAATAGCTCTCGCCGTTGTTAGTACAGCACTCATTGTAGTCATTTTGTGCTTCTTATGCTTCTGGATTTATAGTAGGAAGCATCTATCCAAATCCAACAGGAAAAGCGTTCCCAACTCAGGTAATGCCGAGAAAGGGGTTGCGCTTGCTCCATTTTTAAGTAAATTCAGTTCTGTAAAAATGGTTGGGAAAAAAGGGTCTCTTCCAATCATTGATTATAAGCAAATAGAAAAAGCGACCAACAATTTCCAGGAAAGTAACATATTGGGGCAGGGTGGATTTGGATGTGTTTACCGGGCTCGGTTGGATGATAATCTGGATGTTGCCGTCAAGAGACTACACTGTGAAACTCAAAGTGCTGAGAGAGAATTCGAGAACGAGGTGAATTTGTTAAGTGAAATTCGGCATCCAAATATAATTTCTATACTCGGTTGCTGCGAAAATGATGTCAAGAGGTTCATTGTCTATGAATTGATGCAAAACGGATCCCTGGAAGCTCAATTACACGGACCCTCTCATGGTGCGGCATTGACCTGGCACATGAGAATGAAAATTGCTCTTGATATAGCGAGAGGATTAGAATATCTCCATGAGCACCGTAAACCTGCAGTGATCCATAGAGATCTGAAATCGTCTAATATTCTTTTAGATGAGAACTTCAATGCTAAGCTGTCTGATTTTGGGCTGGCCATAATGGATGGAACCCAAAGCAAGAGTAACATAAAGCTGTCAGGCACATTGGGGTACGTTGCCCCTGAGTATCTCCTAGATGGGAAATTGACTGATAAAAGTGATGTGTATGCATTTGGGGTTGTGCTTCTGGAGCTTCTGCTGGGAAGGAAGCCGGTGGAAAAACTGTCACCATCTCATTGCCAATCGCTGGTGACGTGGGCGATGCCACAGCTCACGGACAGATCAAAGCTTCCAAGCATAGTAGATCCAGTAATCAAGGACGCCATGGACCCCAAGCATTTATACCAGGTAGCAGCAGTGGCTGTGCTGTGCGTGCAAGCAGAACCGAGTTACAGGCCGTTGATCACAGATGTGCTGCACTCGCTGGTGCCTCTGGTTCCGGTGGAGCTGGGAGGAACTCTCAGAGTCTCATCACATGTGCCCCACTCTGTTATGGCGTGA 1335 0.4562 MNTKLLPFLLLLLLLLHEPISVHAAADPPAPASALQTNSSIPASMAASSPGIQVENKEHQMDLHKKMVIALAVVSTALIVVILCFLCFWIYSRKHLSKSNRKSVPNSGNAEKGVALAPFLSKFSSVKMVGKKGSLPIIDYKQIEKATNNFQESNILGQGGFGCVYRARLDDNLDVAVKRLHCETQSAEREFENEVNLLSEIRHPNIISILGCCENDVKRFIVYELMQNGSLEAQLHGPSHGAALTWHMRMKIALDIARGLEYLHEHRKPAVIHRDLKSSNILLDENFNAKLSDFGLAIMDGTQSKSNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLSPSHCQSLVTWAMPQLTDRSKLPSIVDPVIKDAMDPKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLVPLVPVELGGTLRVSSHVPHSVMA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0670 444 SUPERFAMILY Protein kinase-like (PK-like) 129 420 IPR011009 -
Lele26g0670 444 Pfam Protein tyrosine and serine/threonine kinase 153 387 IPR001245 GO:0004672|GO:0006468
Lele26g0670 444 Gene3D Transferase(Phosphotransferase) domain 1 226 425 - -
Lele26g0670 444 PANTHER OS01G0750732 PROTEIN 20 423 - -
Lele26g0670 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Lele26g0670 444 CDD STKc_IRAK 156 423 - -
Lele26g0670 444 FunFam probable receptor-like protein kinase At1g80640 226 425 - -
Lele26g0670 444 Gene3D Phosphorylase Kinase; domain 1 115 225 - -
Lele26g0670 444 ProSitePatterns Protein kinases ATP-binding region signature. 156 178 IPR017441 GO:0005524
Lele26g0670 444 FunFam Protein kinase superfamily protein 117 225 - -
Lele26g0670 444 SMART serkin_6 150 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0670 444 ProSiteProfiles Protein kinase domain profile. 150 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0670 Lele-ChrLele26 4258306 4261157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0670 54 424 Receptor kinase-like Gene Family AT3G58690 43.045 1.26e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lele26g0670 PK_Tyr_Ser-Thr 2.4e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0670 26 4258306 4261157 Lele02g0652 02 3890440 3894033 CCT
Lele26g0670 26 4258306 4261157 Lele04g0670 04 4041032 4044615 CCT
Lele26g0670 26 4258306 4261157 Lele27g1426 27 20514280 20517132 hybridization
Lele26g0670 26 4258306 4261157 Lele28g0655 28 4177400 4181406 hybridization