Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0667 ATGGCGTACCACAACCATCATCTCTCTCAAGACCTACCACTCCACCATTTCACGGAGCAATCTCATCATCAGCAGCAGCAGCAGCAGAACCAGGCGCTGACTGATAACTCCTTGCGAACGATATTGCAGGACCCGACCAGTAAGGCCGGCTCCGATCCCCACCAACACCACCACCCGCTTCAAACCGCTCCCAATTGGCTCAACAACGCTCTTCTCCGAACTCACTACGCCGACAACAATAACGGCAACAACAGCAACACCTCTGCTCCTAACAATACCAACGCCACCAATTTCCTCAACCTCCACACCGCAGGCTCCGACTCCACCGGAGCTGCTTCCCAATCCTCCAGCCAATGGCTGGCACGCCCGATCCTCAACCGGAATCATAGTGACGTCATTGACGACGTTGCCGCCGGTGACTCTATCATCGCCGGTGCGGCTTTGTCCCATGAGTCCGCGGATTTAAAGGCGACCGGCGACAACCTTAATAGCAAGGGCGAGGCGGTGGTGGTGGACAGCGCCGGCGCCACCGGGGACGGTTTGATGAACTGGCAGTATGCTAGGTTCAAGGCGGAGATTCTTGCCCACCCGCTGTACGAACAGCTGCTATCGGCACACGTGGCGTGCCTACGGATCGCCACGCCGGTTGACCAGTTGCCGAGGATCGATGCTCAGCTGGCTCAGTCGCAGAATGTGGTTGCCAAGTACTCGGCGTTGGGACACGGGAGCCAGAGCATGGTTGGGGACGATAAGGAACTCGATCAGTTCATGTCGCACTATGTCTTGTTGCTTTGTTCGTTCAAAGAACAACTTCAACAACATGTCAGAGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGAGATAGAGCAATCCTTACAAAGTCTAACAGGAGTTTCGCCCGGAGAAGGAACAGGGGCAACAATGTCAGATGATGAAGACGACCAGGTGGACAGTGATGCCAACCTGTTTGATGGTAGTTTGGATGGTTCAGACATGGGATTTGGTCCCCTTATTCCAACGGAGAATGAGAGGTCCCTCATGGAGCGTGTAAGGCAGGAATTAAAGCACGAACTTAAACAGGGTTACAAAGAGAAAATTGTGGACATAAGGGAGGAAATTTTGCGCAAGAGACGAGCAGGGAAACTTCCTGGTGACACAACCTCTGTTCTTAAAGCTTGGTGGCAGTCACATTCCAAGTGGCCTTACCCTACCGAGGAAGATAAGGCAAGGTTGGTTCAGGAAACTGGTTTGCAATTGAAGCAGATTAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAATCCCTCCACCTCAACGGTTTTGAAGAGCAAGCGCAAAAGGGGATAA 1359 0.5261 MAYHNHHLSQDLPLHHFTEQSHHQQQQQQNQALTDNSLRTILQDPTSKAGSDPHQHHHPLQTAPNWLNNALLRTHYADNNNGNNSNTSAPNNTNATNFLNLHTAGSDSTGAASQSSSQWLARPILNRNHSDVIDDVAAGDSIIAGAALSHESADLKATGDNLNSKGEAVVVDSAGATGDGLMNWQYARFKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGHGSQSMVGDDKELDQFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDEDDQVDSDANLFDGSLDGSDMGFGPLIPTENERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKRG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0667 452 CDD homeodomain 377 438 IPR001356 GO:0003677
Lele26g0667 452 SUPERFAMILY Homeodomain-like 376 439 IPR009057 -
Lele26g0667 452 ProSiteProfiles 'Homeobox' domain profile. 374 437 IPR001356 GO:0003677
Lele26g0667 452 Pfam KNOX1 domain 190 230 IPR005540 GO:0003677|GO:0005634
Lele26g0667 452 Pfam Homeobox KN domain 394 433 IPR008422 GO:0003677|GO:0006355
Lele26g0667 452 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 22 436 - -
Lele26g0667 452 ProSiteProfiles ELK domain profile. 354 374 IPR005539 GO:0003677
Lele26g0667 452 MobiDBLite consensus disorder prediction 76 114 - -
Lele26g0667 452 SMART HOX_1 376 441 IPR001356 GO:0003677
Lele26g0667 452 Pfam ELK domain 354 375 IPR005539 GO:0003677
Lele26g0667 452 SMART ELK_2 354 375 IPR005539 GO:0003677
Lele26g0667 452 MobiDBLite consensus disorder prediction 297 316 - -
Lele26g0667 452 Pfam KNOX2 domain 247 297 IPR005541 GO:0003677|GO:0005634
Lele26g0667 452 Gene3D - 375 436 - -
Lele26g0667 452 FunFam homeobox protein knotted-1-like 3 isoform X1 375 436 - -
Lele26g0667 452 SMART KNOX1_2 187 231 IPR005540 GO:0003677|GO:0005634
Lele26g0667 452 SMART KNOX2_2 243 298 IPR005541 GO:0003677|GO:0005634
Lele26g0667 452 MobiDBLite consensus disorder prediction 43 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0667 Lele-ChrLele26 4230247 4233080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0667 1 451 Homeobox Transcription Factor Family AT5G25220 66.102 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Lele26g0667 KNOX2 1.3e-21 No_clan