Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0660 ATGGCTATCAACGATGAGGTTCATGACAATGTTATCCTCGTCTTTGTGCTGCGACATTTGATGGAACTCAACTTCACTGAGACTGCTCATTGTGGAGCAAGACGCTATGCCAGAGACATTGTGAACCACGAGTTCCCTCAGTTTACACCATACAACAACAGAATATATGATCAAGCAATGGAGCTGGTTTGCATGGAGAATTACAGGAATCATCATGTGATGAGAAGGTATGTGCTTCCAGGAACAAGGAGACTTGTGGTGGAGGAGTTGAAGAAATGCATCAGAGAAAACCGGGCTTTTCAGGGAAAACTCGATCTTCCTTCATTACCGACGATGAGTGATTGTACGATTTCGCCAAAGCCTTTGATTTTTTCTCTTTATGATACATACCAATATTCTGAACTGCGTGAAAGTGGGTGCTACTTTGACAAGAAACATTTTGAGGACATGGTGCTTTCTGGGAAATTTGAAGACGCTGAGACTTATCTATCTTGTTTCCCAAATGTTGATGACGATAGAAATGATCGTTCCAAGGCTCTAGATATCCTGATAAAGGATCTCAAAGTTTTTTACCCAGGACGCGAAGAGCTTCTCAAAGAAATGACTCAGCTGTTGACAATTAATAATATAAGGGAACATGAGTCACTTTCAAACTACCAAGACACAAATTCTGTGAGGAAGATTATCTTAGAGGATCTTAAAACAATGATTGAAGAAAATCCACTGCTTAATGGAAAGCTTAAGTTTCCTGCTATAAAATCTCAGAGGTTAACTAGTCTTCTAAACCAAAGCTTAAACGGGCATCATCTTCCTTGCAATCATCCTATTCCTGAGCCTGTTACACAAACTCTCTTTGCGGGCCATGTTTGTAAGCTGTGCTTAAATCCTGTAAACAGTGATGATTGTGGCCCTTCGACTGTAACAGATTCCTTACTCTTCCCTACTGCTGATGAAAGTTCAGAAACGGCTGTGAAGAATGAAACACATGGGGTGCCTCGTGTGCAGGTAACATCATCGGCCGTAGAAAGTTACTTGCCCAAGAAAGTTATGACACTGAATGATGATTCGCCTCCTACTAGCATGGTTCATCCTAATTGGCAAACTATTCTTCTAGTTGGAATTGAAATTGGCAATTTAGGAATTTGGTATGCTACCTCTGGTAAGAGGTTGCTTCTTGTAAATTTTGAGGTTTGGGACATTGAAGCATGTTCAACCAATTTCAAGATTGAAGCTCATAATGGCAGTGTCAATGATATAGCGTTTTCTCTTGTCCGTGAGCAACTATTAGTCATAACATGTGGTGACGACAATAAAGTAAAGATACCGGAGAGCGATATTATAAATTCTGTGCTCACAATACTCCAGTTTGTTCCATCTGTCCTCATGAGAAGGAAAATGTTCTTGCTTTTTTCATGTGGTGTTGGCCAGGATGGAGAGCCATTTCTTGTGGAATGGGATGACAGTGAAGGGTGCATAAAAAGAGTCTACGAGGGACTTAAGGCTCCATGGACAATGTGCAGCTATTGTCAAGCACCAATGCCGATGGGGCCTTGCTGATTGTTGGCTGTTGCTGCAAGAGAAAATAAAATAAAAATCTTAGCACCTGATTATGATGATTTGCAGATGAAAAATGAAGCTCGTTCTATTCATGCCCCTACTGTTCTGTCTGAAACCTCAGCAGAGATTGTGAGACTGATTTACACCAGCGTGGGAAAGGCCATCTTGGCATTGGCATCAGATGATATCACATGCAGGCAACCTACCAAGTTTCCCCTCGCTTATGGCAACCGAGGAATGGCCCGCAGTTTATGCAATGACCTCGCGAATGTCACCGAAGAATCAATAGGCTGTTTTGCAATATCAAAAAATGATTCATATCTCATTTCAGCATCAGGTGGTTCAATCTCCTTGTTCAACATGTTGACATTCAAGATTATGGCAACTTTCTTGTCTCCACCACCTAAGGCAACATTTATTTCCTTCTACCCTCGAGATAATAATATAATTGCTGTAATTGCTGTAGGCTTTGATGATTCTAGCATCTTTATTTTTAACGTCCTTGTGAACCAGGTTATGAGAAAACTCAAGGGTCACTCAACAAGAATTACTTCCCTTGCCTTCTCAGACACATTACATGTTCTTGTTTCTGCTGAGGTTAATAATCAGATTATCTTACGGGATGTTGAAGGGTGGAGAAAATTGAAAGGAATGCACTTGCAGATACCTGCTCAGAGGAAGCCAGAATTGCCATCTGATACTCACATTCAGTTTCACCCAGAACAGATAAACTTCCTTGCTTTACAAGATATACTTCCTTTGGTTATCTCCCATGCATTTTTCTCATCTGATGGAATGGAAATATATGCCGGTTTTGTGGATGGGACTATCACAATATTAGACGCTTCAAATCTTGAACCTCTTTGCAGGATAGAGCCCACTGCTTACCTTCCCCCTACTTCAAGTGAGAGCATCTACCTACTTGCTATGGCTGCAAATCCGGCGAAGGCAGGGAAGTTTACTTTGGGGTTTTTAGATGGTAATGGGTATGTGATGGAGCCTCCTGAGCCAGAACTTAAGTTGTCCGCACTTTCATGTGATGATGACAAGGAGGAAGCAGAAGCCTGGGGTGTGGGAAAGGGAATGGTTGGACCACGCAAATTTGTGTTCGCCAAGAAGGAATCTTTGAAAAAGAAGGAATCTGAGGAAGTGCAGAAGCGACAAGGCAGCCATCGAATCATCACGAACCAAGCTCAAAATAATGACAACTCCATCAAGCTGTTCACTGATGGTTAA 2793 0.4168 MAINDEVHDNVILVFVLRHLMELNFTETAHCGARRYARDIVNHEFPQFTPYNNRIYDQAMELVCMENYRNHHVMRRYVLPGTRRLVVEELKKCIRENRAFQGKLDLPSLPTMSDCTISPKPLIFSLYDTYQYSELRESGCYFDKKHFEDMVLSGKFEDAETYLSCFPNVDDDRNDRSKALDILIKDLKVFYPGREELLKEMTQLLTINNIREHESLSNYQDTNSVRKIILEDLKTMIEENPLLNGKLKFPAIKSQRLTSLLNQSLNGHHLPCNHPIPEPVTQTLFAGHVCKLCLNPVNSDDCGPSTVTDSLLFPTADESSETAVKNETHGVPRVQVTSSAVESYLPKKVMTLNDDSPPTSMVHPNWQTILLVGIEIGNLGIWYATSGKRLLLVNFEVWDIEACSTNFKIEAHNGSVNDIAFSLVREQLLVITCGDDNKVKIPESDIINSVLTILQFVPSVLMRRKMFLLFSCGVGQDGEPFLVEWDDSEGCIKRVYEGLKAPWTMCSYCQAPMPMGPCXLLAVAARENKIKILAPDYDDLQMKNEARSIHAPTVLSETSAEIVRLIYTSVGKAILALASDDITCRQPTKFPLAYGNRGMARSLCNDLANVTEESIGCFAISKNDSYLISASGGSISLFNMLTFKIMATFLSPPPKATFISFYPRDNNIIAVIAVGFDDSSIFIFNVLVNQVMRKLKGHSTRITSLAFSDTLHVLVSAEVNNQIILRDVEGWRKLKGMHLQIPAQRKPELPSDTHIQFHPEQINFLALQDILPLVISHAFFSSDGMEIYAGFVDGTITILDASNLEPLCRIEPTAYLPPTSSESIYLLAMAANPAKAGKFTLGFLDGNGYVMEPPEPELKLSALSCDDDKEEAEAWGVGKGMVGPRKFVFAKKESLKKKESEEVQKRQGSHRIITNQAQNNDNSIKLFTDG 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0660 930 Gene3D - 521 875 IPR015943 GO:0005515
Lele26g0660 930 SUPERFAMILY WD40 repeat-like 359 811 IPR036322 GO:0005515
Lele26g0660 930 MobiDBLite consensus disorder prediction 909 930 - -
Lele26g0660 930 MobiDBLite consensus disorder prediction 899 930 - -
Lele26g0660 930 Gene3D - 316 454 IPR015943 GO:0005515
Lele26g0660 930 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 325 408 IPR027728 GO:0006355
Lele26g0660 930 SUPERFAMILY WD40 repeat-like 357 571 IPR036322 GO:0005515
Lele26g0660 930 SMART WD40_4 402 443 IPR001680 GO:0005515
Lele26g0660 930 SMART WD40_4 688 727 IPR001680 GO:0005515
Lele26g0660 930 SMART WD40_4 600 639 IPR001680 GO:0005515
Lele26g0660 930 SMART WD40_4 761 800 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0660 Lele-ChrLele26 4188328 4197768 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0660 26 4188328 4197768 Lele27g1437 27 20590004 20598257 hybridization
Lele26g0660 26 4188328 4197768 Lele28g0644 28 4102424 4109737 hybridization