Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0652 ATGTTTGCAGAAGAGAATGGTCTGAAGGGAGACCCGAGGTTGCGAGCCATCTCGGAAGCCATTAGAGTGGTGCCTCACTTCCCAAAACAAGGAATCATGTTTCAAGATATAACGACATTGTTGTTGAATCACAAAGTCTTCAAAGACACCGTTGATATTTTTGTCGATCGTTACAGAGACATGGATATTTCTGCTGTTGCCGGAGTGGAAGCTCGAGGATTTATGTTTGGCCCGGCAATTGCGCTTGGCATCGGTGCAAAGTTTATTCCCTTGCGCAAACCAAGAAAGCTGCCAGGTGAAGTCATATCAGAAAAATATGTTCTTGAATATGGAACCGATTGTTTGGAGATGCATGTTGGGGCGGTACAGCCCAGGGAACGCGCCTTGGTTATTGATGATTTGGTGGCTACTGGTGGAACTCTATCAGCTGCAATAAGACTACTAGAACGTGTTGGTGCTGAAGTAGTTGAATGTGCTTGTGTGGTTGGCGTGCCTGAGGTCAAGGGACATCGTAGGCTTAATGGGAAGCCACTGTATGTTCTTGTGGAGCCACGCCAAATGGAAAATGGATTTCAAGCAGTCACAGCACAGAGACCACATAATTCGGTTGCTGAATCCATAAGGGTTGGAAAACAGTTCAAGAAAGCTGTGGAAGATCGCAGAGAAGACCATTCGTGA 678 0.4617 MFAEENGLKGDPRLRAISEAIRVVPHFPKQGIMFQDITTLLLNHKVFKDTVDIFVDRYRDMDISAVAGVEARGFMFGPAIALGIGAKFIPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVQPRERALVIDDLVATGGTLSAAIRLLERVGAEVVECACVVGVPEVKGHRRLNGKPLYVLVEPRQMENGFQAVTAQRPHNSVAESIRVGKQFKKAVEDRREDHS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0652 225 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Lele26g0652 225 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lele26g0652 225 Pfam Phosphoribosyl transferase domain 43 169 IPR000836 -
Lele26g0652 225 CDD PRTases_typeI 51 183 IPR000836 -
Lele26g0652 225 Gene3D - 6 184 IPR029057 -
Lele26g0652 225 TIGRFAM apt: adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lele26g0652 225 SUPERFAMILY PRTase-like 20 178 IPR029057 -
Lele26g0652 225 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0652 Lele-ChrLele26 4138990 4143844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0652 11 183 PRT Gene Family AT1G27450 69.364 4.28e-89 259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0652 26 4138990 4143844 Lele01g0646 01 3779193 3780892 CCT
Lele26g0652 26 4138990 4143844 Lele02g0632 02 3783929 3785623 CCT
Lele26g0652 26 4138990 4143844 Lele03g0645 03 3787135 3788835 CCT
Lele26g0652 26 4138990 4143844 Lele04g0652 04 3923199 3924888 CCT
Lele26g0652 26 4138990 4143844 Lele27g1448 27 20663755 20667705 hybridization
Lele26g0652 26 4138990 4143844 Lele28g0634 28 4045680 4051037 hybridization