Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0650 ATGGCTAAAGAAGTCACTGCTACTCCATCAACATCTTCTTTTGACTATGTGCTCTTGGGGGATGATCATGCGAACCTAAGCACTGTCAGAGGTACATCTGGCCACAAAAGTCCATGGATCGAACCTGAGAGGCTGAAACTTCGACACAGGATTGGCCGGGGACCGTTTGGTGATCTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAGTACCATGAAGTTGCTGCCAAGATGTTGTATCCAATCAAAGAGGACAACTTGAGGATTGTATTAGAGAAATTTGATGAATTATATCTTAAGTTCCAAAGAGCGGCTGGGGCTTGCAGGCTCCATGGAATTTCAATTTTAAACGGAAGGATATGCATCATTATGAATTTCTATGAGGGTTCTGTCGGTGACAAAATGGCTAGGCTCAGAGAAGGAAGGATTTCATTGCATGATGTGTTGAGGTATGGAATCAATCTAGCCCAAGGTATTCTGGAACTTCATTCAAAAGGAATCCTAATTCTCAACCTTAAACCCTTTAATGTGCTTCTTGATAATAATGACCAAGCTATTTTGGGAGATTTTGGTATCCCAAATCTTCTGCGTGGCCTCTCATTCCAGGGCCCAGATATGGCTCACAGGCTGGGGACTCCAAATTACATGGCTCCAGAACAATGGCAACCTGAAGTCAGAGGCCCTATATCCTTTGAGACAGATTCATGGGGATTTGGGTGTACCATTGTGGAAATGTTAACTGGTGATCGACCTTGGTATAGGAGATCGGTTGGTGAAATATATCAATTTGTAGTTAGAAAGCATGAGAAACCTCTTATTCCCAGTGGTCTTCCTCCTTCAATTGAGAATATCCTCAGCGGATGCTTTGAGTATGATTTAAGGAATCGTCCCTCAATGGTGGATATTCTGAGCGTATTTAAAAGCTTTCTGGATGCATTAGCCAATGATGGAGGATGGCAATATCTCGGAACCATGAAGGTTGCTGAAAAATCAAGTAGCACAGGCTATACAGATTGGTTTCTTTTAAAGGATCGTCTCCAGGTGAATGACATGGTAAGATCTAGAAAACCAACCAATTCATGCAAAGGTCAAAACATGGATGTCCCGGAAGGAACTGTTGTTGGTTTAGAACGTAGTGCAGATCACGGTTTTGTTTTAGTGAGGGTCCACGGTATTCATGACCCTTTAAGGATTCATAGTTCAACTCTGGAGCGTGTCACATTTGGTTTAGCAGCTGGCGATTGGGTACGCTTGAAGGAGGAAGATGAGAAGCAATCGCCAGTAGGCATTCTGCATTCCATTAGCCGTGATGGTAGAGTGGCTGTTGGATTTATTGGAATGCAAACTCTTTGGACGGGTAGTTCTTCAGAACTTGAAATGGCAGAGCCTTACTGTGTGGGGCAGTTTGTAAGGCTTAAAGTCAATGTTTTGAGTCCTCAATTTGAATGGCCTCATAAAAGGGGAGGGGCCTGGCCTACTGGAAGGATATCATGGATCCTACCCAATGGTTGTCTAATTGTCAAATTCCCAGGGATGTTGACTTTTGGGGATGAAGCAAGCACCTTCTTAGCTGATCCATCCGAGGTTGAAGCAGTCAACTTTAGTACTTGCCCTGGGATCATAGAGAAGTATAAACATGTAGAGGATCATCACTGGTTGGTCAGACCTGCCCTAATTGCATTTGGCCTGTTTACAGCTTTGAAATTAGGCTTGTCAATTGGAAAGAAAATGGGGAAGAACAAGGTGCACGCGAAAGAGAGCGAAAATCAGCACATAGATGCCCAGAATGCTGGCAACTCTGCCTGGAGATCTTCTGGTGCTGTAAATTCTGTCAACACGGTATGGGTTCCTTCAGTTTCCAATATTCTTTTCAGAGAAGGCACTAATGCGTCAACTGGTCGGTAG 1914 0.4363 MAKEVTATPSTSSFDYVLLGDDHANLSTVRGTSGHKSPWIEPERLKLRHRIGRGPFGDLWLATHHQSTEDYDEYHEVAAKMLYPIKEDNLRIVLEKFDELYLKFQRAAGACRLHGISILNGRICIIMNFYEGSVGDKMARLREGRISLHDVLRYGINLAQGILELHSKGILILNLKPFNVLLDNNDQAILGDFGIPNLLRGLSFQGPDMAHRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCTIVEMLTGDRPWYRRSVGEIYQFVVRKHEKPLIPSGLPPSIENILSGCFEYDLRNRPSMVDILSVFKSFLDALANDGGWQYLGTMKVAEKSSSTGYTDWFLLKDRLQVNDMVRSRKPTNSCKGQNMDVPEGTVVGLERSADHGFVLVRVHGIHDPLRIHSSTLERVTFGLAAGDWVRLKEEDEKQSPVGILHSISRDGRVAVGFIGMQTLWTGSSSELEMAEPYCVGQFVRLKVNVLSPQFEWPHKRGGAWPTGRISWILPNGCLIVKFPGMLTFGDEASTFLADPSEVEAVNFSTCPGIIEKYKHVEDHHWLVRPALIAFGLFTALKLGLSIGKKMGKNKVHAKESENQHIDAQNAGNSAWRSSGAVNSVNTVWVPSVSNILFREGTNASTGR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0650 637 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0650 637 SUPERFAMILY Protein kinase-like (PK-like) 42 310 IPR011009 -
Lele26g0650 637 Gene3D Transferase(Phosphotransferase) domain 1 41 363 - -
Lele26g0650 637 CDD STKc_PknB_like 46 304 - -
Lele26g0650 637 PANTHER OS06G0639500 PROTEIN 1 633 - -
Lele26g0650 637 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0650 Lele-ChrLele26 4125467 4128455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0650 32 319 MAP Kinase Kinase Kinase AT4G35780 23.793 5.21e-20 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele26g0650 PK_Tyr_Ser-Thr 4.1e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0657 01 3840760 3847299 Lele26g0650 26 4125467 4128455 CCT
Lele03g0657 03 3848887 3851103 Lele26g0650 26 4125467 4128455 CCT
Lele26g0650 26 4125467 4128455 Lele27g1449 27 20672253 20675231 hybridization
Lele26g0650 26 4125467 4128455 Lele28g0633 28 4034251 4037242 hybridization