Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0646 ATGGTTAGGATTCTGAAACACGGTGGCGGTTCAGGTTCAGCCAATGGCATTATATGCCCATTCGCGTCATCACGTGGACTTCACATGCTCTCTGGACCATCTCTCTTGTGCTCTATAGGCCACATGGAGCTTCAGTTAGGTCTGGCTCTCCCGACTCAGAATCCTATGCAAGGATTCAACCCAACCAGCCATGGCTTGGAGGGTTCAGAGTTAAGGAGGTCCAGTTTCTGTATTGAAAGCCACAGGCATGTCAAAAACAAGCGTAGGTTTGAAGAGTCATTTGGACATTCTTCGAAAACTCTGCCTTTACTGGTATGGAACGGACAGCCAAACGAGGAAGATGACGGAGGTGGGGAGAGGAACAGAAACACTCATCAGGAAAACGAGAATAACGAAGAAGAGAACCGTTTAGTGGGATGGCCACCCATTAAATCATGGAGGAGGAAGAAAATCCATCAGCACCCAAGAGTCCCGATCAGGAACGATAGGATGCTAGCTGAGAATGGAAATAGAGGATCAAACTCTTTATTTGTTAAGGTTAAGATGGAAGGAGTAGCTATAGGACGGAAGATCGATTTGAGGCTTTACATCTCGTACGAGACTCTGACAAATAAGTTATTTAGTATGTTTCATAAATACCATAAGCCTGATGAAGATAAGGCAAGTTATACACTTACGTATCAGGACGAAGAAGGGGACTGGCTGGTTGCTGGAGATGTTCCCTGGCAATCCTTCATTCACTCCGCGAAACGCTTGGAGATAGTAAGGAGCGGCGTTGAAGAATCCACAAACAGCAAATAG 801 0.4582 MVRILKHGGGSGSANGIICPFASSRGLHMLSGPSLLCSIGHMELQLGLALPTQNPMQGFNPTSHGLEGSELRRSSFCIESHRHVKNKRRFEESFGHSSKTLPLLVWNGQPNEEDDGGGERNRNTHQENENNEEENRLVGWPPIKSWRRKKIHQHPRVPIRNDRMLAENGNRGSNSLFVKVKMEGVAIGRKIDLRLYISYETLTNKLFSMFHKYHKPDEDKASYTLTYQDEEGDWLVAGDVPWQSFIHSAKRLEIVRSGVEESTNSK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0646 266 MobiDBLite consensus disorder prediction 101 136 - -
Lele26g0646 266 Pfam AUX/IAA family 77 214 IPR033389 -
Lele26g0646 266 Pfam AUX/IAA family 221 257 IPR033389 -
Lele26g0646 266 MobiDBLite consensus disorder prediction 113 134 - -
Lele26g0646 266 ProSiteProfiles PB1 domain profile. 175 262 IPR000270 GO:0005515
Lele26g0646 266 Gene3D - 170 265 - -
Lele26g0646 266 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 42 257 IPR003311 GO:0005634|GO:0006355
Lele26g0646 266 SUPERFAMILY CAD & PB1 domains 171 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0646 Lele-ChrLele26 4101379 4103865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0646 158 257 B3 DNA Binding Superfamily AT3G61830 36.634 6.10e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele26g0646 AUX_IAA 2.3e-37 CL0072