Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0635 ATGGCAAAAGCAAACAAGTTCAGAGGCGTGAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAAATTCGCCATCCATTACTGAAGAGACGTGTGTGGCTGGGGACTTTTGAGACGGCCGAGGCGGCTGCTCGGGCATACGACCAAGCTGCCATATTGATGAATGGTCAAAATGCGAAGACGAACTTCCCGACTTCAGTGTATCAGCCCCAAGACAACACTACTGCTTCTTTATCTCCCAAGGCTCTTTCGGACCTTCTCAGCACGAAGCTCAGAAAGTGTTGCAAAGCTCCGTCTCCTTCTCTCACCTGTCTCATGCTTGACGCTGATAATTCTCACATTGGCGTGTGGCAGAAGGGAGCAGGACCGCGTTCTGACTCTAAGTGGGTCGTCAGGGTGGAGCTCGGCAACAAGGATCATCAGCCCAAGGAAGAGTCCGATTCTTCGTCGTCGGTGAGGTCATCGGTGCCGGAGACTGGTGCACAAGCAGAAAATCTGGTGGGGGATGAAGAAGACATGGTCGCAATGCAGATGATTGAAGATCTTCTTAACTGGAACTATCCTTGCTCTCCGAGTGCTTCTCATGAGGAATAG 591 0.5245 MAKANKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSVYQPQDNTTASLSPKALSDLLSTKLRKCCKAPSPSLTCLMLDADNSHIGVWQKGAGPRSDSKWVVRVELGNKDHQPKEESDSSSSVRSSVPETGAQAENLVGDEEDMVAMQMIEDLLNWNYPCSPSASHEE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0635 196 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Lele26g0635 196 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 146 - -
Lele26g0635 196 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Lele26g0635 196 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Lele26g0635 196 MobiDBLite consensus disorder prediction 135 168 - -
Lele26g0635 196 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Lele26g0635 196 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Lele26g0635 196 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Lele26g0635 196 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Lele26g0635 196 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Lele26g0635 196 FunFam Ethylene-responsive transcription factor 2 5 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0635 Lele-ChrLele26 4040689 4041392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0635 1 194 AP2-EREBP Transcription Factor Family AT5G25390 56.061 4.80e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g0635 AP2 1.6e-12 CL0081