Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0620 ATGGCAAAGAAGAAGAATCCCTTGGTTTTTATGGATGTCTCTATAGATGGGGACCCTGTTGAAAGGATGGTTTTTGAGCTGTTCTATGACATTGCTCCCAAGACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGAGTCTGTCCAAGTATTGGGAAACCACTGCACTACAAGGGTTCCTTCTTTCATCGCATTTTAAAAGGCTCCATTGTGGAGGGAGGTGATTTTGTCAATCGAAACGGGACTGGTGGAGAAAGCATATATGGCTCGAATTTCCCAGATGAGTCACCTAGGCTTAAGCATGATGCACCAGGTCTCCTGTCGATGGCAATTGCTAATCGCGATACTCTTGGTTCTCACTTTATGATTACATTGAAAGCTGATGACCATCTCGACAGGAAGCATGTGGTCTTTGGGAAGCTTGTTCAAGGACTTAATATATTGAAGAAAATTGAAAATGTGGGTGATGAAGATGGGCTTCCAACTGTAACTGTTAAAATCATCAATTGTGGTGAATATAGTGAAGATGGAAAGAAGATGAATAAATTGACTTCTGAAACCAATAATCATGAAGCACGACGGAAGGGAAAGCACAAAAAATCTTCAAGAGACAGAAGGAAAAGGAGAAAAAGATACTACTCATCTGAATCAGAGAGTAATTCAGATTCAGACATGGAATCATCAGAATCTCATAGTGATTCTGACTCAGATCTGTCATCATCATCGTACATAAGTTCTTCCAGTGACGATAGGCGGAAAAAGAGAAAAAGATATTCTAGGAAAGACAAACATAGACGCCGAAAAAGAAGGGATAGGCGTCGGGACAAGAGGCGACGGAGACGAGATAAAAGATCAAAGCGTAGATCTAGAAGGGATTCGGACACTGCTACTGATTCAGATAGTGAAAGCAAAAGTGACGGCAGCTCTGATGGTGGAAGTCTTGATGCTCAAGGGAAGGAGAAAAAGCGCAGAGATTATTCTCTGAAAAATGCTGAAGTTCAGTCTCCCCTAGCTGGGGTTAGAGAAGTACATTCCATGCATCATAAAAGGAGGGGAGAAGTGAACACCCCAGAGAATGAGGAAGCATCCCCCAAAGAAAATGGAGAACGTCATACCAATGGTATTGGAGTTGACTCTAGATCTGATAGAACTGAGGAGAGGCAGCCTGATGTGATGGATGATAATCCTGGCAAATCTAGGAGTCGAAGCATGAGTCCCAAGAGGACCATGAGTAAGAGTATGAGTATTAGTCCCAGGAGAAGTGAGAGCAAGAGCCCAAGTGCTAGTCCAGAAAGGAAGATTAGCAGAAGTCCTAGTGGTAGTAGAAGCCCTCGAGCTCCATCCAGGAAGAGTTTCAGCAGAAGTCCTGCCAGGAGCATCAGTAGAAGCCCAAGCAGAAGCCCAGTGAGGGTTACGAAGGGAAGAAGTGGCAGTAGGAGCCCTGTGAAAACCCGCTCACTAAAAAGTGTCAGTGAGAGTCCTGTGAGATCCCCATCTCATAGCCGCCGGAGCAGGAGTTCTCCTAGACTATCATTGAGAAGATCTGCTAGTAGAAGCCCTGTAAGGGTTAGGAGGAGCAGAAGCAGGAGTCCAGTTAGATCTTCTGCAAGGAGCTTGAGCAGAAGCTCTGGCAGGGTCCCATCAAGGAGAGGTGTCAGCCAAAGCCCTGTGAGGGCACCTATTAGAGGAAATCGACGCAGCTATTCGAGGAGTCCTAGTCCTGTTCGTAGGCCAAAGTCATCTCGTGGATTGTCAAGGAGTGTCTCTCCTGATGTATCCCCGAAGCGTATCAGAAGGGGAAGAGGTTTTAGTGAGAGATACTCGTATGCAAGGAGGTATCGAACCCCTTCTCGATCTCCTGTGAGGTCTTATCGGTACAATGGAAGAAGTGACCGAGACAGATATTCTAGTCACAGAAGGTATTCCCCTAGGCGCTACAGAAGCCCCCCGCCTCGAGGAAGAACACCGCCCAGGTACCGAAGCAGAAGAAGTAGGACACCCTCAGCATCTCGCAGCCCTCGCTATCATGGTCGCCGCTACAGCCGAAGCGTAAGCCGAAGCCGAAGCCCTGTTCGTGGTCATTCCCCTGTTGAGCCATATAGATCTCGTGCTTCGCCTCGTGTTGAGAAGCGCAGGTCATCTTCTCGAAGTCGAAGCTGCAGCCTCTCGAAGTCTAGGTCTTCTGTTGAATCACAGTCTCCTCGAGCTGCCAGTAAAGACAGATCAAGGTCATCCTCCCGAAGCCCAGATGGAAAGAAAGGCTTGGTCTCATATGGCGATGGTTCTCCATATTCAGACCAAAGGTGA 2313 0.4704 MAKKKNPLVFMDVSIDGDPVERMVFELFYDIAPKTAENFRALCTGEKGVCPSIGKPLHYKGSFFHRILKGSIVEGGDFVNRNGTGGESIYGSNFPDESPRLKHDAPGLLSMAIANRDTLGSHFMITLKADDHLDRKHVVFGKLVQGLNILKKIENVGDEDGLPTVTVKIINCGEYSEDGKKMNKLTSETNNHEARRKGKHKKSSRDRRKRRKRYYSSESESNSDSDMESSESHSDSDSDLSSSSYISSSSDDRRKKRKRYSRKDKHRRRKRRDRRRDKRRRRRDKRSKRRSRRDSDTATDSDSESKSDGSSDGGSLDAQGKEKKRRDYSLKNAEVQSPLAGVREVHSMHHKRRGEVNTPENEEASPKENGERHTNGIGVDSRSDRTEERQPDVMDDNPGKSRSRSMSPKRTMSKSMSISPRRSESKSPSASPERKISRSPSGSRSPRAPSRKSFSRSPARSISRSPSRSPVRVTKGRSGSRSPVKTRSLKSVSESPVRSPSHSRRSRSSPRLSLRRSASRSPVRVRRSRSRSPVRSSARSLSRSSGRVPSRRGVSQSPVRAPIRGNRRSYSRSPSPVRRPKSSRGLSRSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSSHRRYSPRRYRSPPPRGRTPPRYRSRRSRTPSASRSPRYHGRRYSRSVSRSRSPVRGHSPVEPYRSRASPRVEKRRSSSRSRSCSLSKSRSSVESQSPRAASKDRSRSSSRSPDGKKGLVSYGDGSPYSDQR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0620 770 MobiDBLite consensus disorder prediction 179 770 - -
Lele26g0620 770 MobiDBLite consensus disorder prediction 404 503 - -
Lele26g0620 770 MobiDBLite consensus disorder prediction 534 552 - -
Lele26g0620 770 MobiDBLite consensus disorder prediction 568 590 - -
Lele26g0620 770 MobiDBLite consensus disorder prediction 179 194 - -
Lele26g0620 770 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Lele26g0620 770 MobiDBLite consensus disorder prediction 344 403 - -
Lele26g0620 770 Gene3D - 1 183 IPR029000 -
Lele26g0620 770 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lele26g0620 770 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Lele26g0620 770 MobiDBLite consensus disorder prediction 720 737 - -
Lele26g0620 770 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Lele26g0620 770 MobiDBLite consensus disorder prediction 255 289 - -
Lele26g0620 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lele26g0620 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lele26g0620 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lele26g0620 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lele26g0620 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lele26g0620 770 MobiDBLite consensus disorder prediction 594 614 - -
Lele26g0620 770 MobiDBLite consensus disorder prediction 317 331 - -
Lele26g0620 770 MobiDBLite consensus disorder prediction 290 307 - -
Lele26g0620 770 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Lele26g0620 770 MobiDBLite consensus disorder prediction 195 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0620 Lele-ChrLele26 3965302 3970436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0620 25 170 U-box Gene Family AT5G67530 41.892 2.83e-22 100