Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0616 ATGTTGGGAGGGCATGAATCGGTGATAAAGCTTCTGATAGACAATGGTGGAGACCTATCCTGTGCGGACGTAGGGCATCTGGCATGTTCTGCAGTGGAGCAAAACAACTTGGAATTGCTCAAAGAAATTGTAGGATATGGCGGCGATGTGACGCAGCTCAGAAGCAACGGCACAACGGCACTTCACACGGCGGTATGCGATGGAAACACTGAGATTGTAAATTTCCTTGTACACCAAGGAGCAGATATTGATAAACCAGACGTTCATGGATGGACTCCTCGGACTCTGGCAGATCATCAAGGCCATGAAGATATCGTAGAGATGTTCCGCAGCATCCGGGAGAGCAAAACACCCCTTGTTACTCCCACCGCGATGAATTATTCCAAGTGCCCCGGTAAGTTTCGTAGTGAACCAACGACGCGTGCCCCTCAAGACGTGACTTGGTTGCAGAATAATCCAAGGCGAAGAGCCGACCATTTTCACAATTCTTTCTTTGGGATCATGTCGGCTGCTGCTAACCGTGATCAAGCCCATGCATCTTCGCAAGACAACGATAATGTTGCAGAGAACCTGAATGGATTCGCAGCGAGAGTAGTTGTGAGTTGTCCAGAAAAAGGGGAACATGGTGGGAAGCTCGTGTTTCTGCCGAAGTCCCTTGAAGAACTGATAGACATAGGGGTGAAAAAGTTCGACTTTTTGGCCAACAAAATTCTGACTAGAGAAGGAGCTGAGATTGAGGATATAAAGCTTATAAGAGATGGAGATCATCTCATTCTTGCACGGGATAGAGCTCTTGAGCCCGATGAAGAAGGCAGGTAG 819 0.4799 MLGGHESVIKLLIDNGGDLSCADVGHLACSAVEQNNLELLKEIVGYGGDVTQLRSNGTTALHTAVCDGNTEIVNFLVHQGADIDKPDVHGWTPRTLADHQGHEDIVEMFRSIRESKTPLVTPTAMNYSKCPGKFRSEPTTRAPQDVTWLQNNPRRRADHFHNSFFGIMSAAANRDQAHASSQDNDNVAENLNGFAARVVVSCPEKGEHGGKLVFLPKSLEELIDIGVKKFDFLANKILTREGAEIEDIKLIRDGDHLILARDRALEPDEEGR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0616 272 ProSiteProfiles KHA domain profile. 197 272 IPR021789 -
Lele26g0616 272 ProSiteProfiles Ankyrin repeat region circular profile. 56 87 - -
Lele26g0616 272 Pfam KHA, dimerisation domain of potassium ion channel 197 259 IPR021789 -
Lele26g0616 272 Gene3D - 1 111 IPR036770 -
Lele26g0616 272 PANTHER POTASSIUM CHANNEL AKT1 2 262 IPR045319 GO:0005249|GO:0006813
Lele26g0616 272 SUPERFAMILY Ankyrin repeat 4 112 IPR036770 -
Lele26g0616 272 Pfam Ankyrin repeats (3 copies) 27 109 IPR002110 GO:0005515
Lele26g0616 272 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Lele26g0616 272 SMART ANK_2a 20 52 IPR002110 GO:0005515
Lele26g0616 272 SMART ANK_2a 89 118 IPR002110 GO:0005515
Lele26g0616 272 SMART ANK_2a 56 85 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0616 Lele-ChrLele26 3933839 3934754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0616 1 262 Ion Channels AT2G26650 45.387 8.37e-71 229