Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0609 ATGGGATCTTACAAAGATCAAGAACAAGAAGAACAAGCTAAATGTGCTTGGGTTCATGGACCTATCATCATAGGTGCTGGTCCCTCTGGTTTAGCAGTCGCCGCTTGCCTCTCTCAACATGGCGTCCCCTGTGTTATTCTTGAGAAGAGTGACTGTTTAGCTTCTCTATGGAAACACAAAACGTACGACCGTCTCAAACTTCACCTTCCCAAACACTTCTGTGAACTTCCCTTGATGGGTTTCCCTCCCAATTTCCCCAAGTACCCCACCAAATACCAGTTCGTTTCATACCTTGAGTCATATGCTTCCCACTTCTCAATTCAACCCCGGTTCAATCAAACCGTCATGAGTGCAGAGTTCGACCAAAGTTGCGGCTTTTGGACGGTTCGAACCCAGGATTTTGAATACATTTCCCGGTGGCTTGTAGTGGCCACTGGTGAAAATGCGGAGCCGGTAATTCCTAAGATTTCTGGAATGGAGTCGTTTCATGGACCCGTTGTTCATACTAGTCTCTTCAAGTCCGGTTCTGATTACAAGAGCCAGAGGGTTTTGGTCATTGGGTGTGGCAATTCGGGCATGGAAGCAAGCTTGGATCTTTGCAGACACAATGCATTCCCTTTTATGGTCGCCAGGAACACTATACATGTTCTACCTAGGGAGATGTTTGGCATCTCAACATTTGGAATTGCCATGGCCCTCCTTAAATGGTTCCCTTTAAGATTAGTAGACAAGTTTCTCCTGATGCTGAGCAGTTTCATCTTGGGAAACACCGATCGTTATGGTCTCCGGCGACCCAAAACAGGACCCCTTGAACTAAAAAACGCCACCGGAAAAACTCCTGTTCTAGACGTCGGAGCACTATCACATATCAAATCCGGGAAAATTAAGGTGATGCAAGGAGTGAAGGAGATAACGAGAAATAGTGTGAAGTTCGTGGATGGTGAAGAGAGAGAGTTCGATGCTATAATCTTAGCAACGGGTTACAGAAGCAACGTGCCTACTTGGCTCAAGGGGTGTGATTTTTTCACTGAAGACGGAATGCCGAAAACGCCCTTTCCAGAGGGTTGGAAGGGAGAGAATGGATTGTATACGGTGGGGTTCACCAGAAGAGGTCTGCTCGGAACCGCTTCTGATGCCACCAAGATCGCCCAAGACATCGCTCACCGGTGGAGGACCGTCAAGGACAGCAAGAATTATCGTAATTCCCATATTGTCCTGCTCAAGAGCTCGAAATCCAATCATCAGTGGGCAAAATCCAAGAAAGATATGTAG 1272 0.4693 MGSYKDQEQEEQAKCAWVHGPIIIGAGPSGLAVAACLSQHGVPCVILEKSDCLASLWKHKTYDRLKLHLPKHFCELPLMGFPPNFPKYPTKYQFVSYLESYASHFSIQPRFNQTVMSAEFDQSCGFWTVRTQDFEYISRWLVVATGENAEPVIPKISGMESFHGPVVHTSLFKSGSDYKSQRVLVIGCGNSGMEASLDLCRHNAFPFMVARNTIHVLPREMFGISTFGIAMALLKWFPLRLVDKFLLMLSSFILGNTDRYGLRRPKTGPLELKNATGKTPVLDVGALSHIKSGKIKVMQGVKEITRNSVKFVDGEEREFDAIILATGYRSNVPTWLKGCDFFTEDGMPKTPFPEGWKGENGLYTVGFTRRGLLGTASDATKIAQDIAHRWRTVKDSKNYRNSHIVLLKSSKSNHQWAKSKKDM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0609 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 21 40 - -
Lele26g0609 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 182 200 - -
Lele26g0609 423 SUPERFAMILY FAD/NAD(P)-binding domain 22 213 IPR036188 -
Lele26g0609 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 139 147 - -
Lele26g0609 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 178 202 - -
Lele26g0609 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 20 42 - -
Lele26g0609 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 22 400 - -
Lele26g0609 423 SUPERFAMILY FAD/NAD(P)-binding domain 181 391 IPR036188 -
Lele26g0609 423 Gene3D - 21 396 IPR036188 -
Lele26g0609 423 FunFam Flavin-containing monooxygenase 21 395 - -
Lele26g0609 423 Pfam Pyridine nucleotide-disulphide oxidoreductase 22 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0609 Lele-ChrLele26 3890764 3892915 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0609 26 3890764 3892915 Lele02g0600 02 3604683 3606951 CCT
Lele26g0609 26 3890764 3892915 Lele04g0618 04 3747195 3749215 CCT
Lele26g0609 26 3890764 3892915 Lele27g1487 27 20909923 20912034 hybridization
Lele26g0609 26 3890764 3892915 Lele28g0596 28 3814586 3816741 hybridization