Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0596 ATGCATGTCAAATCGGCACAATCATCGTATCGGGATCGGACACAGGAGTTCCAGAGTATAGCAGAGAGGCTAAAGAAGTTAGTGTCATCCGGATCAGGGCCAAACGGGCCAAGTAGTAGTTCAAGATCGGAGGAACAGCGATCTGCGATCGCAATCCAGTCAGAATTCAATAGGAGGGCTTCCAAGATTGGTTATGGGATACATCAGACGTCACAGAAACTTGCTAAGCTGGCCAAGCTGGCAAAAAGGACTTCGGTTTTTGATGACCCCACCATGGAAATTCAAGAGCTCACAGCAGTTATTAAGCAAGATATCACTGCACTGAACTCTGCCGTTGTGGACCTGCAGCTAATCAGCAACTCTAGGAATGACAGTGGAAATATCTCTAGTGACACAACTAGTCATTCGACCACAGTTGTGGATGACCTTAAAACTCGATTGATGAGCACCACAAAAGAATTTAAAGAAGTCCTCACCATGCGAACAGAGAACTTGAAGGTACATGAGAATAGAAGACAGCTCTTTTCTTCCACTGCTTCTAAGGAAGCTGTGAATCCTTTTGTTCGTCAACGTCCCTTGGCTGCAAAGTCAGCTGCCAATACCCCTGCACCCCCATGGGCTAGTGGATCAACATCTTCATCTCAGTTTCTCCCAAAGAAGCAAGTGGATGGGGAGAGTCAACCGTTGCTGCAGCAGCAGCAGCAGCAGCAGCAATTGGTTCCATTGCAGGATTCTTATATGCAGAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGTTGAGCAGCATTTTTAATCAATTGGCGACACTTGTTTCCCAACAAGGGGAAGTTGCCATCAGGATTGATGAGAACATGGACGATACGTTGGCAAATGTAGAAGGGGCACAGGGGGCTTTGCTAAAATATCTCCACAGTATATCTTCTAATAGGTGGCTGATGATTAAGATATTCTTTGTATTAATATTTTTTCTCATGGTTTTCCTATTTTTTGTGGCATAG 1011 0.4491 MHVKSAQSSYRDRTQEFQSIAERLKKLVSSGSGPNGPSSSSRSEEQRSAIAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLISNSRNDSGNISSDTTSHSTTVVDDLKTRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKEAVNPFVRQRPLAAKSAANTPAPPWASGSTSSSQFLPKKQVDGESQPLLQQQQQQQQLVPLQDSYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYLHSISSNRWLMIKIFFVLIFFLMVFLFFVA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0596 336 MobiDBLite consensus disorder prediction 203 218 - -
Lele26g0596 336 Gene3D - 51 299 - -
Lele26g0596 336 Pfam SNARE domain 281 332 IPR000727 -
Lele26g0596 336 MobiDBLite consensus disorder prediction 31 47 - -
Lele26g0596 336 ProSitePatterns Syntaxin / epimorphin family signature. 250 289 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele26g0596 336 PANTHER SYNTAXIN 50 328 IPR045242 -
Lele26g0596 336 SMART tSNARE_6 239 306 IPR000727 -
Lele26g0596 336 CDD SNARE_syntaxin5 247 325 - -
Lele26g0596 336 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 244 306 IPR000727 -
Lele26g0596 336 FunFam Syntaxin-32 like 50 299 - -
Lele26g0596 336 SUPERFAMILY t-snare proteins 54 299 IPR010989 GO:0016020|GO:0016192
Lele26g0596 336 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 8 26 IPR021538 -
Lele26g0596 336 MobiDBLite consensus disorder prediction 194 218 - -
Lele26g0596 336 MobiDBLite consensus disorder prediction 23 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0596 Lele-ChrLele26 3796785 3800193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0596 1 336 SNARE and Associated Proteins AT3G24350 65.651 2.23e-150 425